Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02213 ATGGCTACTACATTGTGTATATACCTATTCCTTCTCTCTGTAACTGTGAGCTTTACATTTCTGAATCTTACCTCATGCTCATCAGAGGCTGAGATCCTGCTCTCCTTCAATGCCTCCATTGAAGACACTAGGAAGTCTCTTGCTAGCTGGTCCAATAATTCTTACTGTAACTGGATTGGAATCACCTGCGACACTGCATCTGTTACTTCTATTAACCTTCAAAGCTTAAACCTTTCTGGGGATATCTCATCTTCAATATGTGACCTTCCAAATCTGACTGAACTCAATCTTGCAGATGATCTATTCAACCAGCCTATCCCTCTTCATCTTTCTCAGTGCAGTTCGTTGCAAACTTTGAATCTCAGTAACAATCTCATCTGGGGCACTATCCCATCTCAGATTTCTCTGTTTGGATCCTTGAGAGTGCTTGATTTCAGCAGAAACCACATAGAAGGAAATATCCCAGAAAGCTTAGGCTCATTGAAGAACCTTCAAGTCCTCAACGTGGGGAGTAACCTGCTATCAGGTAGTGTACCTAGTATTTTGAGGAATTTTACTGAGCTTGCTGTGCTTGATTTGTCTCAAAATAAGTACTTGAACAATCTAACCGGTGAGGTTCCTCTTGCTTTGGTGTCTTCTCTGAAGAACTTGGACTCTTTTGATGTTTCTCAAAACAAGCTCACGGGGCCATTTCCAAATGGCATTTGTAAAGGACGTGGACTTATAAATCTCAGTCTCCACACAAATGGTTTCAATGGTTCCATATCCAACTCCATTAGTGAATGTAAGAATCTTGAGAGATTTCAAGTTCAGAACAATGGATTTTCTGGAGACTTTCCTTATGCATTATGGTCATTACCCAAATTTAAGCTCATCAGAGCTGAAAACAACAGATTCTCAGGGCAAATACCTGAGTCAATATCAGAAGCTGTTCAGTTGGAGCAAGTTCAGCTTGACAGTAACGACTTCACTGGGAAAATTCCTCATAATCTTGGGTTGCTCAAGAGCTTATACAGATTCTCTGCGTCTCTTAATCATTTGGCTTCAAAACTTGAAGCTTGCTCTTTCAATGTATCCTTCAATCAGCTATCTGGCAATGTACCTTACTCCATGATTTCTGGTCTCCCTGCCTCATATTTGGAAGGAAACCCTCAACTTTGTGGCCCTGGATTACCTACTTCCTGTTCTGATGACCCACCAAGACACCGTAACTCTGTTCTTACTGCTTTAACATGTGCCTTAatctttctatcttttcttgttgGAGCTGCCATTGTTGCTGCTGGATTTGCATTGTACTGGAGGAGGTCTTCCAAGCAAAATGAAACGGGAGTTTGGCGCTCAGTGTTCTTCTATCCTTTTAGAATAACTGAGCATGATCTACTTATGGGGATGGATGAGAAATTGTTCAAAAGGGAATGGAGGCACAAGAACATTGTGAAAATTCTGGGGTTTTGCCATTCTGACGAGTCAATTCTTCTCATCTATGAGCACTTGCCCAAAGGGAGCTTAGGGGATATGATTTCTCAGCAAGATTTTGAGTTGCAGTGGGAAGTTAGACTAAGGATTGCCATTGGGGTTGCCCAAGGATTAGCCTATCTTCACAAGGATTATAATCCCCATTTGCTTCACAGAAATCTCAAGTCAAACAACATTCTGTTGGATGCAAACTTCGAGCCAAAACTCAGAGATTTTTCTCTTGATCGAATTGTGGGCGAAGCTTCATTTCAATCAACTCTTGCTTCTGCAGCAGCATCTTCTTGTTATAATGCTCCAGAATATAGTTATAGTTATAGTTATAGTAAGAAAGCAAGCGAACAATTGGACGTGTACTGCTTTGGTATTGTGCTGCTAGAGCTAatGCAGACAGCAGCAATTTGTGGTGGTCAGAGGAATGATCGTTGGGAAGTGTCACAGCTATACAAAGGTGTTCAGAAGGCCAAGGATGCACCGTTTTATGTAGCTTTTATAGAAGACAGTGGGATCATAAGTAGATATGACCAGGAAGAAAACGCAGCCAAATCTCGTGACTTGGTGGCTTTGAAATTTTGGGGAACTTCCGCAGAAACTAATTTtccaCAAAGTGAGTACAAGGACAATCTGAAAACTATAGCTAGGATGTCTAAACAAGATGTTGTGGCTGCTGTTAGAGCGATAAGTAGAAGCTGCTGGCGATCAACCTCAAGGTATAGAGGCGTATCCAGAAATCAATATACAGGAAAATGGCAAGCAAATGTTTCTCTAGGCCACAGAAACTTTTTCCTGGGAGTTTTCAGAACCGAAGAGGAAGCCGCCATCGCTTatgatattgaaattataaagtgGAGTGGAGAAAGAGCTGTCACAAATTTTGATATCAACTTGTACGACGTCAGAGCCATTGTGGATTCCTTTTTTCCACAAGAGGATGAGTGGGAAGTAGTTGACACAACATTGTCCTTAGAAATGAAGGAGATGGACAAGGACAATAATTGTGATGCGACCACCTCAACCTTTGGGTGGGCACTCAGAGGATACAATAATAAGAGGATGAAAATTGgggaatcctatgatgttccTCGACACCTGAGCTTGAGCTTGGCCTTCAACCATTCGCCTACCAAGCCATTTAAAATTTCGTCTCCTTCTTCCTG 2633 0.4079 MATTLCIYLFLLSVTVSFTFLNLTSCSSEAEILLSFNASIEDTRKSLASWSNNSYCNWIGITCDTASVTSINLQSLNLSGDISSSICDLPNLTELNLADDLFNQPIPLHLSQCSSLQTLNLSNNLIWGTIPSQISLFGSLRVLDFSRNHIEGNIPESLGSLKNLQVLNVGSNLLSGSVPSILRNFTELAVLDLSQNKYLNNLTGEVPLALVSSLKNLDSFDVSQNKLTGPFPNGICKGRGLINLSLHTNGFNGSISNSISECKNLERFQVQNNGFSGDFPYALWSLPKFKLIRAENNRFSGQIPESISEAVQLEQVQLDSNDFTGKIPHNLGLLKSLYRFSASLNHLASKLEACSFNVSFNQLSGNVPYSMISGLPASYLEGNPQLCGPGLPTSCSDDPPRHRNSVLTALTCALIFLSFLVGAAIVAAGFALYWRRSSKQNETGVWRSVFFYPFRITEHDLLMGMDEKLFKREWRHKNIVKILGFCHSDESILLIYEHLPKGSLGDMISQQDFELQWEVRLRIAIGVAQGLAYLHKDYNPHLLHRNLKSNNILLDANFEPKLRDFSLDRIVGEASFQSTLASAAASSCYNAPEYSYSYSYSKKASEQLDVYCFGIVLLELMQTAAICGGQRNDRWEVSQLYKGVQKAKDAPFYVAFIEDSGIISRYDQEENAAKSRDLVALKFWGTSAETNFPQSEYKDNLKTIARMSKQDVVAAVRAISRSCWRSTSRYRGVSRNQYTGKWQANVSLGHRNFFLGVFRTEEEAAIAYDIEIIKWSGERAVTNFDINLYDVRAIVDSFFPQEDEWEVVDTTLSLEMKEMDKDNNCDATTSTFGWALRGYNNKRMKIGESYDVPRHLSLSLAFNHSPTKPFKISSPSS 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02213 877 ProSiteProfiles AP2/ERF domain profile. 729 785 IPR001471 GO:0003700|GO:0006355
Bva04g02213 877 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Bva04g02213 877 Gene3D AP2/ERF domain 728 787 IPR036955 GO:0003700|GO:0006355
Bva04g02213 877 ProSiteProfiles Protein kinase domain profile. 419 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02213 877 CDD AP2 728 787 IPR001471 GO:0003700|GO:0006355
Bva04g02213 877 Pfam Leucine rich repeat 139 197 IPR001611 GO:0005515
Bva04g02213 877 SUPERFAMILY L domain-like 54 389 - -
Bva04g02213 877 ProSiteProfiles Leucine-rich repeat profile. 115 137 IPR001611 GO:0005515
Bva04g02213 877 SUPERFAMILY DNA-binding domain 640 695 IPR016177 GO:0003677
Bva04g02213 877 SUPERFAMILY Protein kinase-like (PK-like) 463 623 IPR011009 -
Bva04g02213 877 Gene3D Transferase(Phosphotransferase) domain 1 456 658 - -
Bva04g02213 877 Gene3D Ribonuclease Inhibitor 179 277 IPR032675 -
Bva04g02213 877 PANTHER - 474 625 - -
Bva04g02213 877 PANTHER - 8 199 - -
Bva04g02213 877 PANTHER - 200 350 - -
Bva04g02213 877 PANTHER - 352 468 - -
Bva04g02213 877 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 474 625 - -
Bva04g02213 877 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 200 350 - -
Bva04g02213 877 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 352 468 - -
Bva04g02213 877 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 8 199 - -
Bva04g02213 877 SUPERFAMILY DNA-binding domain 728 787 IPR016177 GO:0003677
Bva04g02213 877 Gene3D Ribonuclease Inhibitor 278 397 IPR032675 -
Bva04g02213 877 ProSiteProfiles AP2/ERF domain profile. 640 693 IPR001471 GO:0003700|GO:0006355
Bva04g02213 877 Pfam Protein tyrosine and serine/threonine kinase 470 626 IPR001245 GO:0004672|GO:0006468
Bva04g02213 877 Gene3D Ribonuclease Inhibitor 26 178 IPR032675 -
Bva04g02213 877 SMART rav1_2 640 699 IPR001471 GO:0003700|GO:0006355
Bva04g02213 877 SMART rav1_2 729 791 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02213 Bva-Chr4 21189190 21195632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02213 33 689 Receptor kinase-like Gene Family AT5G06940 41.212 5.72e-176 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva04g02213 PK_Tyr_Ser-Thr 1.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02213 - - gmx:100794428 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02213 04 21189190 21195632 Bva04g02213 04 21189190 21195632 ECH