Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02210 ATGGAGACCAACAATGGTGACACCAAGTCTAAGATGGAGGACTATGAAGTAATCGAGCAAATTGGCAGGGGAGCATTCGGCTCTGCTTTTCTCGTTCTCCACAAGTCTGAGGAAAAAAGGTATGTGCTGAAGAAGATTCCGTTGGCCAAGCAAACTGAGAAGTTCCAACAGACGGCGTATCAGGAGATGAACCTGATTGCAAAACTAAATAACCCATATATTGTGGAGTACAAAGATGCTTGGGTTGAGAAGGGGGATTACATATACATAATAACTGGCTATTGTGAAGGAGGTGACATGGCTGAGAAGATAAAGAAAGCCCGAGGATCATTTTTTCCTGAGGAGAAGCTCTGCAAATGGCTGACTCAGTTGTTGTTAGCTGTGGACTACCTGCATTCTAATCGTGTGCTCCACAGAGATCTTAAGtGTTCCAACATATTCCTCaccaaagaaaatgacatcCGGCTTGGTGACTTTGGTATTGCAAAGCTACTCAATACAGAAGATCTTGCTTCCTCGGTTGTTGGAACTCCAAAATACATGTGTCCTGAGCTCCTTGCAGATATACCTTATGGCTATAAGTCTGATATATGGTCTCTGGGTTGCTGCATGTTTGAAATTGCTGCTCATCAACCAGCATTTCGTGCTCCAGACATGGCTGGccttatcaataaaataaatagatccTCCATTTCTCCACTGCCAATTGTATATTCTTCCTCGCTGAAACAGATCATCAAAAGCATGCTACGGAAGAACCCAGAAAAAAGACCAACTGCAGCAGAACTGTTAAGGCATACTCACCTGCAGCCATATGTTCTCCGCTGCCGTAATGcatcttctaattttcttccAGTATCTCCCATAAGTAGCTCAAAGGATAAAACAAGAAGATCTACTAGATCTGGTGGTGGCAAAGTTCATAGGAACAAAGAAGTGGgattaataaatcatttggaACGGGTTCGTCCATTTGAGGGAAATGGAGATGTACAGCCTAGCAATTCTTCTAATGATGACAAGCTAACAGTATCGAGCAGTGCAGAAGACAACCTCGAGACCAAGATGGTTGATCCCATCAGTTTTGTAGTAGAATCGTCTACTAGCATCTGTGGCTCAAAAGATAGGTCAACAACATCTGAATCAACCGGTTGCAGTGTGTCCAATGAATCAGACGCCAAAAGAATACCCGGAAGGGAATCAGTTGACAATGAGATCACATCAAGAAGTTCACCAAATTTTGAGCACGAAGGACAAGGAGGATTTACTGCTGAACAGTTTCATAAATCAGAAGTGACTAACATAATAAATACAGTGGAAAACACAGAAGTTGAAGATATTCTTTctgatgaatattttgatgaaGCTAAAGCACAGGGGGAAGAAACCAAATCTGTGGACTCCAGAAAATCAATAACATCCAATGCAGGCAGCACTCATAAGGATGGGTTTCTTGACGAGGAAAGGTCACCACCAACTCTGCAGCCTATCGGGGTTGAACATGACATTGAATCTGTAAATTGctcaaagaaaaaggaaaattctgATGGATTTATCGAAGGCTCTAATTTGGACCCTATGGCTTCTGCCAGTGCAGAGAGCACTGAAAAGGATGGGTCACTTGATGAGGAGAGGTCAGCACCAACTACGCAGCCTATTAGGGTTGAACATAACATTGAATCTATAAGTTGCttaaagaaaagggaaaatccTGATGGGTTTACAGAAGGCTCTTTCTTGGATCCTACGTCTTCTGAGAGTAATGGTAAAGTTACTGAAGACATGGCTAAAACACAAGATAGCAGTTGCTCCATACAAAGTGTGGTTGATCAGGGACCAAGTGACAATTCTTTGAGTAGACTTGCTTCAATAATTGGTGATGCAGCCAAGAATTTGTCGGATGGTCCAGGCCATCAAAGAGCCGATGCTCTGGAATCTCTGCTTGAGTTATGTGCTCAGCTACTTAAGCAAGACAAACTAGAAGAACTTGCCGGTGTGCTAAAACCATTTGGGGGAGAAGCTGTATCGTCCAGAGAAACGGCAATATGGTTGACAAAGAGCCTTCTGTGTGcacaaaaatttaatgcaGAAACTTA 2096 0.4022 METNNGDTKSKMEDYEVIEQIGRGAFGSAFLVLHKSEEKRYVLKKIPLAKQTEKFQQTAYQEMNLIAKLNNPYIVEYKDAWVEKGDYIYIITGYCEGGDMAEKIKKARGSFFPEEKLCKWLTQLLLAVDYLHSNRVLHRDLKCSNIFLTKENDIRLGDFGIAKLLNTEDLASSVVGTPKYMCPELLADIPYGYKSDIWSLGCCMFEIAAHQPAFRAPDMAGLINKINRSSISPLPIVYSSSLKQIIKSMLRKNPEKRPTAAELLRHTHLQPYVLRCRNASSNFLPVSPISSSKDKTRRSTRSGGGKVHRNKEVGLINHLERVRPFEGNGDVQPSNSSNDDKLTVSSSAEDNLETKMVDPISFVVESSTSICGSKDRSTTSESTGCSVSNESDAKRIPGRESVDNEITSRSSPNFEHEGQGGFTAEQFHKSEVTNIINTVENTEVEDILSDEYFDEAKAQGEETKSVDSRKSITSNAGSTHKDGFLDEERSPPTLQPIGVEHDIESVNCSKKKENSDGFIEGSNLDPMASASAESTEKDGSLDEERSAPTTQPIRVEHNIESISCLKKRENPDGFTEGSFLDPTSSESNGKVTEDMAKTQDSSCSIQSVVDQGPSDNSLSRLASIIGDAAKNLSDGPGHQRADALESLLELCAQLLKQDKLEELAGVLKPFGGEAVSSRETAIWLTKSLLCAQKFNAET 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02210 698 SMART serkin_6 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02210 698 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Bva04g02210 698 MobiDBLite consensus disorder prediction 369 390 - -
Bva04g02210 698 MobiDBLite consensus disorder prediction 458 590 - -
Bva04g02210 698 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 9 494 - -
Bva04g02210 698 MobiDBLite consensus disorder prediction 560 574 - -
Bva04g02210 698 Pfam Protein kinase domain 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02210 698 MobiDBLite consensus disorder prediction 287 350 - -
Bva04g02210 698 CDD STKc_Nek 14 266 - -
Bva04g02210 698 MobiDBLite consensus disorder prediction 369 419 - -
Bva04g02210 698 MobiDBLite consensus disorder prediction 329 350 - -
Bva04g02210 698 ProSiteProfiles Protein kinase domain profile. 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02210 698 Gene3D Transferase(Phosphotransferase) domain 1 95 281 - -
Bva04g02210 698 MobiDBLite consensus disorder prediction 294 325 - -
Bva04g02210 698 Gene3D Phosphorylase Kinase; domain 1 1 94 - -
Bva04g02210 698 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 543 680 - -
Bva04g02210 698 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 9 494 - -
Bva04g02210 698 MobiDBLite consensus disorder prediction 504 518 - -
Bva04g02210 698 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 543 680 - -
Bva04g02210 698 MobiDBLite consensus disorder prediction 403 417 - -
Bva04g02210 698 SUPERFAMILY Protein kinase-like (PK-like) 12 300 IPR011009 -
Bva04g02210 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02210 Bva-Chr4 21170378 21175978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02210 9 279 MAP Kinase Kinase Kinase AT3G13530 32.482 8.22e-37 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Bva04g02210 Pkinase 1.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02210 K08857 - gmx:100777214 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02210 04 21170378 21175978 Bva13g02369 13 17971874 17976965 BWGD
Bva04g02210 04 21170378 21175978 Bva04g02210 04 21170378 21175978 ECH