Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02192 ATGGAAATGGCGCTCAGTCTCCACAGCAATTCTTTCTCCATGATTAACCTTAATCTTCAAAGGAGATATTCTCCAACCTTCTTCTCTAACCAACTACTAGGCTCAGGCTTATCTTCAACTACCACCAAACCGCGGTTGCAATTTGTTTCGAGGAACTCTTTTCCGAGGCCTATCAAATGCTCTGTTTCTGAAGCCGCAGAACCTAAAACTGagaagaagaagcagttGATGAGAAGAAATGACATAAGAAATATAGCAATTGTAGCTCATGTTGATCATGGAAAAACCACTTTAGTTGATGCGATGCTGAAACAAACAAAGGTATTTCGTGATAATCAATCTGTACAGGAAAGAATAATGGACTCAAATGATTTGGAGCGTGAAAGGGGAATCACCATACTAAGTAAAAACACATCTGTCACCTACAAAGACACCAAGATTAATATAATAGATACTCCAGGCCACTCTGACTTTGGAGGTGAAGTGGAGCGCATACTAAATATGGTGGAAGGAATTCTCTTAGTGGTAGACTCTGTTGAGGGCCCAATGCCACAGACAAGATTTGTTCTAAAGAAGGCTCTGGAGTTTGGCCATGCAGTTGTTGTTGTTGTCAATAAGATAGATAGACCTTCTGCTCGACCTGATTTTGTCATCAATTCCACTTTTGAACTGTTTATTGAGCTAAATGCATCAGACGAACAGTGCGACTTTCAAGTAATATATGCAAGTGGTATAAAAGGGCAGGCAGGATTATCTCCTGAAAATCTGGCGGAAGACCTTGGGCCATTGTTTGAATCCATAATCAGATGCATCCCTGGACCACGTATTGACAAAGATGGCGCACTGCAAATGCTTGCTACAAATATTGAATATGATGAACATAAAGGGCGTATAGCAATTGGGCGCTTGCATGCTGGAGTTTTAGGAAGAGGCATGGATGTCAGGGTATGTACCTCAGAAGATTCATGTAGATTTGGAAGAGTTAGTGAACTTTTTGTGTATGAAAAATTTAGTAGGGTTCCTGCAGAAAGAGTGGAGGCTGGTGATATATGTGCTGTATGTGGAATTAGTGATATTCAGATTGGAGAGACAATTGCTGATAAAGCATCTGGGAAGCCGCTGCCTTCCATCAAGATCGAAGAACCAACAGTGAAAATGGCTTTCTCGATAAACACTTCACCTTTTGTTGGCCGTGAGGGGAAGTATGTTACAAGTAGGAACTTAAGGGATAGACTCTATCGAGAACTTGAGCGAAATCTGGCTATGAGAGTGGAAGATGGCGAAACAGCAGACACATTTATTGTCAGTGGGCGGGGAACTTTGCATATCACCATACTCATAGAAAATATGCGAAGAGAAGGATATGAATTTATGGTTGGGCCTCCCAAAGTTATTAACAAAAAGGTGGATGACCAATTGATGGAACCATATGAGGTTGCCACTGTGGAGGTACCAGAAGAACACATGGGAGCTGTTGTTGAACTTCTTGGCAAGAGACGAGGACAAATGTTTGATATGCAAGGAGTTGGATCGGAAGGAACTACACTACTCAAATATAAGATCCCAACTCGTGGTCTTCTTGGATTGCGAAATGCTATTTTAACTGCTTCCCGTGGAACAGCAATTCTGAACACTATTTTTGATAGCTATGGGCGTTGGGCTGGTGATATCAATACTCGGGATCAAGGCTCACTGGTTGCCTTTGAGGATGGAACAAGTACTTCTTATGCACTCCACAGTTCACAGGAGAGAGGACAGATGTTTATTGGTCCTGGTGTGGAAGTTTATAAAGGTCAAATTGTTGGGATCCACCAGAGACCTGGGGACTTACTTTTAAATGTTTGCAAGAAAAAAGCTGCAACAAACATACGTTCCAACAAGGAACAAACAGTGGTTCTTGACACCCCATTGGATTATAGTCTGGATGACTGCATCGAGTACATCGAAGAAGATGAACTGGTAGAGGTCACTCCCCAAAGTATTCGAATGTGCAAGAATCCAAAACTTGTGAAGAAAACAAGATCATTGATCTGTTTTATTTGGAATGCTGATATCTCAAGTGGGCACAACAGAGCCAACGAACCAGGTGCCATGGCTGGACCGAATGTGAAACAGAAAACGGTAGAGATAGAAGGGAGGTTGGATGGGATCAATAAGAAGTTGGAAGATCTTCAACGTATTAGTAGAATGGAAGCTGAGATGCAGATGATGAAGGATGCTCTCACTGTCATCTTAGAGCAATTGAAGAGCGAaaacaaggggaaaaaaggTGCTCCGAGATG 2282 0.4145 MEMALSLHSNSFSMINLNLQRRYSPTFFSNQLLGSGLSSTTTKPRLQFVSRNSFPRPIKCSVSEAAEPKTEKKKQLMRRNDIRNIAIVAHVDHGKTTLVDAMLKQTKVFRDNQSVQERIMDSNDLERERGITILSKNTSVTYKDTKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDFVINSTFELFIELNASDEQCDFQVIYASGIKGQAGLSPENLAEDLGPLFESIIRCIPGPRIDKDGALQMLATNIEYDEHKGRIAIGRLHAGVLGRGMDVRVCTSEDSCRFGRVSELFVYEKFSRVPAERVEAGDICAVCGISDIQIGETIADKASGKPLPSIKIEEPTVKMAFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPKVINKKVDDQLMEPYEVATVEVPEEHMGAVVELLGKRRGQMFDMQGVGSEGTTLLKYKIPTRGLLGLRNAILTASRGTAILNTIFDSYGRWAGDINTRDQGSLVAFEDGTSTSYALHSSQERGQMFIGPGVEVYKGQIVGIHQRPGDLLLNVCKKKAATNIRSNKEQTVVLDTPLDYSLDDCIEYIEEDELVEVTPQSIRMCKNPKLVKKTRSLICFIWNADISSGHNRANEPGAMAGPNVKQKTVEIEGRLDGINKKLEDLQRISRMEAEMQMMKDALTVILEQLKSENKGKKGAPR 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02192 760 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 61 697 - -
Bva04g02192 760 SMART EFG_C_a 472 561 IPR000640 -
Bva04g02192 760 PANTHER BNAC09G43450D PROTEIN 61 697 - -
Bva04g02192 760 Pfam Elongation factor G C-terminus 472 558 IPR000640 -
Bva04g02192 760 TIGRFAM TypA_BipA: GTP-binding protein TypA/BipA 82 669 IPR006298 GO:0005525
Bva04g02192 760 CDD BipA_TypA_C 475 554 IPR035651 -
Bva04g02192 760 Gene3D bipa protein 560 639 IPR042116 -
Bva04g02192 760 Pfam Elongation factor Tu domain 2 296 365 IPR004161 GO:0005525
Bva04g02192 760 SUPERFAMILY EF-G C-terminal domain-like 380 464 IPR035647 -
Bva04g02192 760 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 282 IPR027417 -
Bva04g02192 760 Gene3D Elongation Factor G (Translational Gtpase), domain 3 383 666 - -
Bva04g02192 760 SUPERFAMILY Translation proteins 229 376 IPR009000 -
Bva04g02192 760 CDD BipA_III 382 460 - -
Bva04g02192 760 Pfam Elongation factor Tu GTP binding domain 81 272 IPR000795 GO:0003924|GO:0005525
Bva04g02192 760 Gene3D - 79 275 IPR027417 -
Bva04g02192 760 PRINTS GTP-binding elongation factor signature 200 209 IPR000795 GO:0003924|GO:0005525
Bva04g02192 760 PRINTS GTP-binding elongation factor signature 128 136 IPR000795 GO:0003924|GO:0005525
Bva04g02192 760 PRINTS GTP-binding elongation factor signature 84 97 IPR000795 GO:0003924|GO:0005525
Bva04g02192 760 PRINTS GTP-binding elongation factor signature 148 158 IPR000795 GO:0003924|GO:0005525
Bva04g02192 760 CDD BipA_TypA_II 282 375 - -
Bva04g02192 760 Gene3D Translation factors 276 376 - -
Bva04g02192 760 SUPERFAMILY EF-G C-terminal domain-like 475 590 IPR035647 -
Bva04g02192 760 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 80 275 IPR000795 GO:0003924|GO:0005525
Bva04g02192 760 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 121 136 IPR031157 -
Bva04g02192 760 Gene3D - 466 559 - -
Bva04g02192 760 TIGRFAM small_GTP: small GTP-binding protein domain 82 231 IPR005225 GO:0005525
Bva04g02192 760 CDD TypA_BipA 81 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02192 Bva-Chr4 21065815 21072756 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02192 82 209 Eukaryotic Initiation Factors Gene Family AT3G22980 43.846 6.64e-24 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02192 K06207 - gmx:100785222 1161.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02192 04 21065815 21072756 Bva04g02192 04 21065815 21072756 ECH