Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02190 ATGGGTAACTGTTGCGTAACTCCATCCCAgactaaaaagaagaaaaagaacccATTTTCGATCGATTACGGGTACAATCATGGTAATGATGGAGGCAAGCTCATCGTTCTTAAAAATCCAACCGGCCAAGAAATCGAGCAAAGATACGAACTGGGTCGGAAGCTTAGAAGAGGAGAACTCGGAATCACCTATTTGTGCACCGATAAAGAAACGCGTGAGATTTTCGCCTGCAAATCGATATCgaagaagaagctgagaaCCGCCGTTGATATTGAGGATGTGAGGATAGAGGTTGCGATCATGAAGCATTTGCCAAAGCATCAAAATATCGTAACCTTGAAGGACACTTATGAGGACGACAGTGCGGTCCATATTGTGATGGAATTGTGCGAGGGAGGAGAGTTGTTCGATCGCATCGTTGCACGCGGCCACTACACAGAACGAGCTGCCGCCGTGGTCACACGGACCATCGTGGAAGTTGTGCAGATGTGCCACCAACATGGAGTGATGCATCGGGATCTCAAACCTGAGAACTTTCTGTTTGGAAACAAGGAGGAAACAGCACCTCTGAAGGCTATTGATTTTGGGTTTTCAGTGTTCTTCAAACCTGGTGAAAGATTTACTGAGAAAGTCGGAAGTCCATATTATATGGCTCCTGAGGTGTTAAAGCAAAATTATGGCCCAGAAGTAGATATCTGGAGTGCTGGAGTAATTCTTTACATCTTACTTTGTGGTGTTCCACCGTTTTGGGCAGAAACTGAACAAGGAGTCGCACAAGCAATTATACGATCAGTTATTGACTTTAAACGGGATCCCTGGCCAAAAGTTTCCGATAATGCAAAAGACCTCGTGAAGAAGATGCTTGATCCTGATCCAAAGCGGCGGCTCACTGCTCAGGAAGTGTTAGATCATCCATGGTTACAGAATGCATA 932 0.4356 MGNCCVTPSQTKKKKKNPFSIDYGYNHGNDGGKLIVLKNPTGQEIEQRYELGRKLRRGELGITYLCTDKETREIFACKSISKKKLRTAVDIEDVRIEVAIMKHLPKHQNIVTLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAVVTRTIVEVVQMCHQHGVMHRDLKPENFLFGNKEETAPLKAIDFGFSVFFKPGERFTEKVGSPYYMAPEVLKQNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSDNAKDLVKKMLDPDPKRRLTAQEVLDHPWLQNA 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02190 310 SMART serkin_6 49 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02190 310 ProSiteProfiles Protein kinase domain profile. 49 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02190 310 CDD STKc_CAMK 48 306 - -
Bva04g02190 310 Gene3D Transferase(Phosphotransferase) domain 1 136 310 - -
Bva04g02190 310 PANTHER SERINE/THREONINE-PROTEIN KINASE 8 310 - -
Bva04g02190 310 Gene3D Phosphorylase Kinase; domain 1 51 135 - -
Bva04g02190 310 SUPERFAMILY Protein kinase-like (PK-like) 47 308 IPR011009 -
Bva04g02190 310 Pfam Protein kinase domain 49 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02190 310 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 32-LIKE 8 310 - -
Bva04g02190 310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02190 Bva-Chr4 21055007 21057619 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02190 1 310 EF-hand Containing Proteins AT3G57530 78.704 0.0 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva04g02190 Pkinase 1.8e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02190 K13412 - cpap:110811275 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02190 04 21055007 21057619 Bva04g02190 04 21055007 21057619 ECH