Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02189 ATGGGTAATTGTTGCGTAACTCCATCCGAGactagagagaagaaaaagggaaagaagcaACAGAACCCATTTTCGATCGATTCCGGGCACAATCATGGTAATGATGGAGGCAAGCTCATCGTTCTTAAAAATCCAACCGGCCGAGAAATCGAGCAAAGATACGAACTGGGTCGGGAGCTTGGAAGAGGAGAATTCGGAATCACCTATCTGTGCACCGATAAAGAAACGCGTGAGATTTTCGCCTGCAAATCGATATCgaagaagaagctgagaaCCGCCGTTGATATTGAGGATGTGAGGAGAGAGGTTGAGATCATGAAGCATTTGCCAAAGCATCAAAATATCGTAACCTTGAAGGACACATATGAGGACGACAGTGCGGTCCATATTGTGATGGAATTGTGCGAGGGAGGAGAGTTGTTCGATCGCATCGTTGCACGCGGCCACTACACAGAACGAGCTGCCGCCGTGGTCACACGGACCATCGTGGAAGTTGTGCAGATGTGCCACCAACATGGAGTGATGCATCGGGATCTCAAACCTGAGAACTTTCTGTTTGGAAACAAGAAGGAAACAGCAACTCTGAAGGCTATTGATTTTGGGTTGTCAGTGTTCTTCAAACCTGGTGAAAGATTTAATGAGATAGTCGGAAGTCCATATTATATGGCTCCTGAGGTGTTAAAGCGAAATTATGGCCAAGAAGTAGATATCTGGAGTGCTGGAGTAATTCTTTACATCTTACTTTGCGGTGTTCCACCGTTTTGGGCAGAAACTGAACAAGGAGTCGCACAAGCAATTATACGATCAGTTATTGACTTTAAACGGGATCCCTGGCCAAAAGTTTCCGATAATGCAAAAGACCTCGTGAAGAAGATGCTTGATCCTGATCCAAAGCGGCGGCTCACTGCTCAGGAAGTGTTAGATCATCCATGGTTACAGAATGCAAAGAAAGCTCCCAATGTTTCATTGGGAGAAACCGTAAAAGCAAGGCTTAAGCAATTCTCTGTAATGAACAAGCTTAAGAAAAGAGCTTTGAGGGTGATTGCAGAGCATTTATCCGTAGAAGAAGCCGCTGGAATAAAGGAAGTATTCCAGATGATGGATACTGGGAATAAAGGCAAGATTAACATTGATGAATTACGCGTAGGGTTGCATAAACTAGCTCAACAAGTTACTGATGACGATCTTCAAAGTCTGATGGAGGCTGGTGATGTTGATAATGATGGATACCTGGATTATGGAGAATTTGTAGCCATTTCTGTCCATCTGAAGAAAATTGGCAATGATGAGCACCTTCACAAAGCCTTCAAATTCTTTGATAGGAACGAAACTGGGTATATAGAACTTGAGGAGCTGCGTCATGCCTTGGACGATGAACTCGGTCCTAACAGTGAAGAAGTCATCAATGCAATTATGCACGATGTGGACACAGATAAGGATGGACGGATAAGCTATGAAGAATTTGCTGCAATGATGAAAGCCGGCACAGATTGGAGAAAGGCATCAAGGCAGTATTCACGAGAGAGATTTACAAGTCTCAGTTTGAAACTGATGCTTGACGGATCTCTGCAATTAAGCAACAGCACACAATG 1592 0.429 MGNCCVTPSETREKKKGKKQQNPFSIDSGHNHGNDGGKLIVLKNPTGREIEQRYELGRELGRGEFGITYLCTDKETREIFACKSISKKKLRTAVDIEDVRREVEIMKHLPKHQNIVTLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAVVTRTIVEVVQMCHQHGVMHRDLKPENFLFGNKKETATLKAIDFGLSVFFKPGERFNEIVGSPYYMAPEVLKRNYGQEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSDNAKDLVKKMLDPDPKRRLTAQEVLDHPWLQNAKKAPNVSLGETVKARLKQFSVMNKLKKRALRVIAEHLSVEEAAGIKEVFQMMDTGNKGKINIDELRVGLHKLAQQVTDDDLQSLMEAGDVDNDGYLDYGEFVAISVHLKKIGNDEHLHKAFKFFDRNETGYIELEELRHALDDELGPNSEEVINAIMHDVDTDKDGRISYEEFAAMMKAGTDWRKASRQYSRERFTSLSLKLMLDGSLQLSNSTQ 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02189 530 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 32-LIKE 10 509 - -
Bva04g02189 530 ProSiteProfiles EF-hand calcium-binding domain profile. 355 390 IPR002048 GO:0005509
Bva04g02189 530 SUPERFAMILY Protein kinase-like (PK-like) 52 320 IPR011009 -
Bva04g02189 530 ProSitePatterns EF-hand calcium-binding domain. 404 416 IPR018247 -
Bva04g02189 530 CDD EFh 431 493 IPR002048 GO:0005509
Bva04g02189 530 MobiDBLite consensus disorder prediction 1 40 - -
Bva04g02189 530 ProSitePatterns Protein kinases ATP-binding region signature. 60 83 IPR017441 GO:0005524
Bva04g02189 530 ProSiteProfiles EF-hand calcium-binding domain profile. 427 462 IPR002048 GO:0005509
Bva04g02189 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Bva04g02189 530 Gene3D Transferase(Phosphotransferase) domain 1 140 320 - -
Bva04g02189 530 SMART efh_1 359 387 IPR002048 GO:0005509
Bva04g02189 530 SMART efh_1 467 495 IPR002048 GO:0005509
Bva04g02189 530 SMART efh_1 395 423 IPR002048 GO:0005509
Bva04g02189 530 SMART efh_1 431 459 IPR002048 GO:0005509
Bva04g02189 530 Pfam Protein kinase domain 54 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02189 530 ProSitePatterns EF-hand calcium-binding domain. 440 452 IPR018247 -
Bva04g02189 530 ProSiteProfiles Protein kinase domain profile. 54 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02189 530 PANTHER SERINE/THREONINE-PROTEIN KINASE 10 509 - -
Bva04g02189 530 Pfam EF-hand domain pair 360 419 IPR002048 GO:0005509
Bva04g02189 530 Pfam EF-hand domain pair 430 493 IPR002048 GO:0005509
Bva04g02189 530 ProSitePatterns EF-hand calcium-binding domain. 476 488 IPR018247 -
Bva04g02189 530 Gene3D - 321 495 - -
Bva04g02189 530 SUPERFAMILY EF-hand 341 515 IPR011992 -
Bva04g02189 530 ProSiteProfiles EF-hand calcium-binding domain profile. 463 498 IPR002048 GO:0005509
Bva04g02189 530 ProSiteProfiles EF-hand calcium-binding domain profile. 391 426 IPR002048 GO:0005509
Bva04g02189 530 CDD STKc_CAMK 53 311 - -
Bva04g02189 530 SMART serkin_6 54 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02189 530 Gene3D Phosphorylase Kinase; domain 1 56 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02189 Bva-Chr4 21047983 21054891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02189 1 525 EF-hand Containing Proteins AT5G19450 79.584 0.0 872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva04g02189 Pkinase 9.1e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02189 K13412 - cpap:110811275 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02189 04 21047983 21054891 Bva13g02392 13 18116213 18120603 BWGD