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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Bva04g02185
ATGGCTGAAAGAGGTGGAGATCGTGGTGGCTTTGGCCGTGGTTTCGGTGGCCGTGGTCGCGGAGACCGTGGACGTGGAGGTCGCCGCAGGAATGCTGGCCGTCGCGAAGAAGAGGAGAAGTGGGTTCCTGTTACCAAGCTCGGTCGCCTTGTGAAGGAAGGAAGAATCCGTAGCCTGGAGCAGATTTACCTCCACTCCCTCCCAATCAAAGAGCACCAAATCGTGGATACTTTAGTTGGACCCTCCCTCAAGGACGAGGTTATGAAGATTATGCCTGTCCAGAAGCAAACCCGTGCCGGTCAGAGAACCCGTTTCAAGGCCTTCGTTGTTGTCGGTGATGGTAACGGACATGTGGGACTTGGCGTCAAGTGCAGTAAGGAAGTCGCCACCGCCATTCGTGGTTCTATTATATTGGCTAAGCTCTCTGTTATTCCGGTGAGAAGAGGTTACTGGGGTAACAAGATCGGAAAGCCCCACACAGTCCCCTGCAAGGTCACTGGAAAGTGTGGTTCAGTCACTGTGCGTATGGTTCCAGCTCCTCGGGGTGCCGGAATCGTTGCTGCTAGGGTACCCAAGAAGGTTTTGCAGTTCGCAGGAATCGAGGATGTTTTCACTTCTTCAAGGGGGTCGACTAAGACTCTTGGAAACTTCGTCAAGGCCACTTTTGATTGTTTGCTGAAAACCTATGGGTTCTTGACACCTGAATTCTGGAGGGAGACCCGTTTCACCAAATCGCCATTCCAAGAGTACACAGATCTATTGGCTAAGCCAACTGGAAAGGCACTCATCCTCGAGGAAGATCGAGTTGACGCATA
815
0.5239
MAERGGDRGGFGRGFGGRGRGDRGRGGRRRNAGRREEEEKWVPVTKLGRLVKEGRIRSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEYTDLLAKPTGKALILEEDRVDA
271
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Bva04g02185
271
Gene3D
-
146
238
IPR014721
-
Bva04g02185
271
SUPERFAMILY
Ribosomal protein S5 domain 2-like
159
239
IPR020568
-
Bva04g02185
271
Pfam
Ribosomal protein S5, N-terminal domain
83
147
IPR013810
GO:0003723|GO:0003735|GO:0005840|GO:0006412
Bva04g02185
271
SUPERFAMILY
dsRNA-binding domain-like
79
148
-
-
Bva04g02185
271
ProSiteProfiles
S5 double stranded RNA-binding domain profile.
83
146
IPR013810
GO:0003723|GO:0003735|GO:0005840|GO:0006412
Bva04g02185
271
ProSitePatterns
Ribosomal protein S5 signature.
100
132
IPR018192
-
Bva04g02185
271
Gene3D
-
40
145
-
-
Bva04g02185
271
MobiDBLite
consensus disorder prediction
1
38
-
-
Bva04g02185
271
TIGRFAM
uS5_euk_arch: ribosomal protein uS5
36
243
IPR005711
GO:0003735|GO:0006412|GO:0015935
Bva04g02185
271
PANTHER
RIBOSOMAL S SUBUNIT
1
269
IPR000851
GO:0003723|GO:0003735|GO:0005840|GO:0006412
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Bva04g02185
Bva-Chr4
21021390
21023116
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Bva04g02185
37
259
Cytoplasmic Ribosomal Protein Gene Family
AT3G57490
89.238
1.50e-150
420
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Bva04g02185
K02981
-
gmx:100797105
466.463
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