Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02182 ATGGAAATTCTGTGCTTCTTGTATCTCCTGCTAGCTGGTTTTCTGTCAAAATCTCAGCTTGTGGGTGCTCAGCTCCAGGACCAAACTGTATTGGTTGCCATTAACGCAGAGCTTAAAGTATCTGGATGGGATGTCAACACGAATTACTGCTCTTGGCAAGGTGTAAGCTGTGGGAGCAACTCAATGGTGGAGAAGCTCGATCTCTCTCATAAGAACCTTGGAGGTAATGTGACTTTAGTTGCTGAGCTCAAAGCTTTGAAGCGGCTTGACCTTTCAAATAATAACTTCCATGGAGTGATTCCTTCAGCTCTTGGAAATTTGTCTGACCTTGAAGTTCTAGATTTGTCTGCAAATATGTTTGAAGGTTCAATTCCACCAGGATTGGGTGGTCTGAGGAGCCTTAAATCATTAAACCTTTCCAACAATTTGCTTGTGGGAGAAATACCAAATGAACTTAAAGGCCTGGAGAAATTGCAGGAAATTCAGATTTCTAGTAATCAATTGAGCGGTTCAATACCCCCTTGGGTGGGTAATTTGACCAATCTAAGAGTTTTTACAGCCTACGAAAATCGTTTAGATGGTAGGATTCCAGATAATCTGGGTTTGAATTCTGAGCTTCAATTACTTAACCTGCATTCAAACCAGCTTGAAGGGCCTATACCAGCAAGCATTTTTTTCCACGGAAAGCTGGAAGTTCTGGTTCTCACCCAGAACAATTTTAGTGATGATATTCCTAAAGAAATTGGGAATTGCCAAGGCCTTTCCAACGTCCGAATTGGCAACAATCATCTTGTAGGCACAATTCCTAAGACCATTGGAAACATAAGTAGCCTTACCTACTTTGAAGCAGACAATAACAATCTTTCTGGAGAGGTGGTGTCAGATTTTGGTCAGTGTTCTAATCTCACCCTCCTGAATTTAGCTTCAAATGGATTTACGGGAACAATTCCACCTGAATTTGGACAGCTAATGAACCTTCAGGAATTAATTCTTTCTGGAAATAGCCTCATTGGTGCTATTCCAAATTCGATTTTGAGGTGCAAAAGCCTTAACAAGCTTGATGTAAGCAATAATAGACTCAATGGCACGATACCAAGTGAAATCTGCAATATCTCAAGGTTGCAGTTCTTGCTCTTGAGTCAGAATGCCATTAGAGGGGAGATCCCTCATGAAATTGGAAATTGTGCAAAACTTCTTGAATTGCAACTGGGCAGTAACTATATGACTGGAATTATTCCTTCTGAGATTGGTCACATCAGGAACTTACAGATTGCTTTAAATTTGAGCTTTAATCATCTTCATGGACCGCTGCCGCCTGAATTGGGAAGACTGGACAAGCTTGTTTCTCTGGATGTTTCCAGCAATCGGATCTCAGGCAATATCCCAGTTGAGCTTAGGGGCATGATGAGCTTGATAGAGGTTAACTTCTCAAATAATCTGCTCAGTGGCCCAGTACCTTCATTTATACCATTCCAGAAAAGTCCCAATTCAAGTTTTTCCGGAAATAAAGGGCTTTGTGGGGAGCCATTAACCTCTCCATGTGGAGATCTTTATGATGACCAGAAGAATTACCATCACAGGGTTTCTTACCGAACCATACTTGCCGTAATTGGTTCTGGTCTGGCAGTTTTTACATCAGTAACTCTGGTTGTTTTGCTGTTTATGATCAGAGAGAAGCAAGAAAGAGTGGCCAAAGATGCTGGAATTGCAGATGAGgaaatcaataacaatcccaCTATAATATCTGGGACTGTTTTTGTTGAGAATCTAAGACAAGCAGTAGATCTTGATACTGTTGTTAAAGCAACACTGAAAGATTCTAATAAGCTTAGCAGTGGAACTTTCAGCACAGTTTACAAGGCAGTCATGCCTTCTGGAATGAGTTTATCAGTAAGGAGACTCAAGTCCATGGACAAGACAATAGTTCACCACCAGAATAAGATGGTCAGAGAACTTGAAAAGCTGAGCAGACTCTCTCATGAAAATCTAGTGCGGCCCATTGGTTATGTTATTTATGAAGATGTTGCACTTCTCTTGCATCATTATTTACCCAACGGAACATTATCACACCTCCTTCATGAATCTACCAAGCAAACTGAATATCAACCTGACTGGCCTACTAGGCTGTCAATTGCCATTGGAGTGGCTGAGGGTTTGGCTTTCCTTCATCATCTGGCAATTATCCACCTTGATATTTCTTCTGGGAATGTTCTTTTGGATGCAAATTTTAAACCTTTGGTTGGGGAGATAGAGATATCAAAACTTCTGGATCCGACCAAAGGCACTGCAAGTATCAGTGCAGTTGCTGGTTCCTTTGGTTACATACCTCCAGAGTACGCATATACAATGCAAGTTACAGCACCAGGAAATGTTTATAGCTATGGTGTTGTTCTGCTTGAGATCCTTACAACTCGGCCACCAGTTGATGAGGCTTTCGGGGAAGGGATAGATTTGGTGAAGTGGGTTCATAGTGCTCCAGTGAGAGGAGAAACTCCTGAGCAGATACTGGATGCTAGGCTCAGCACAGTTTCCTTTGGTTGGAGGAAAGAAATGCTTGCTGCTCTAAAGGTTGCATTGCTCTGCACTGATAACACGCCAGCAAAACGaccaaaaatgaagaaggtAGTAGAAATGCTTcaagaaataaagcaaaacTG 2657 0.4095 MEILCFLYLLLAGFLSKSQLVGAQLQDQTVLVAINAELKVSGWDVNTNYCSWQGVSCGSNSMVEKLDLSHKNLGGNVTLVAELKALKRLDLSNNNFHGVIPSALGNLSDLEVLDLSANMFEGSIPPGLGGLRSLKSLNLSNNLLVGEIPNELKGLEKLQEIQISSNQLSGSIPPWVGNLTNLRVFTAYENRLDGRIPDNLGLNSELQLLNLHSNQLEGPIPASIFFHGKLEVLVLTQNNFSDDIPKEIGNCQGLSNVRIGNNHLVGTIPKTIGNISSLTYFEADNNNLSGEVVSDFGQCSNLTLLNLASNGFTGTIPPEFGQLMNLQELILSGNSLIGAIPNSILRCKSLNKLDVSNNRLNGTIPSEICNISRLQFLLLSQNAIRGEIPHEIGNCAKLLELQLGSNYMTGIIPSEIGHIRNLQIALNLSFNHLHGPLPPELGRLDKLVSLDVSSNRISGNIPVELRGMMSLIEVNFSNNLLSGPVPSFIPFQKSPNSSFSGNKGLCGEPLTSPCGDLYDDQKNYHHRVSYRTILAVIGSGLAVFTSVTLVVLLFMIREKQERVAKDAGIADEEINNNPTIISGTVFVENLRQAVDLDTVVKATLKDSNKLSSGTFSTVYKAVMPSGMSLSVRRLKSMDKTIVHHQNKMVRELEKLSRLSHENLVRPIGYVIYEDVALLLHHYLPNGTLSHLLHESTKQTEYQPDWPTRLSIAIGVAEGLAFLHHLAIIHLDISSGNVLLDANFKPLVGEIEISKLLDPTKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRPPVDEAFGEGIDLVKWVHSAPVRGETPEQILDARLSTVSFGWRKEMLAALKVALLCTDNTPAKRPKMKKVVEMLQEIKQN 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02182 885 Gene3D Ribonuclease Inhibitor 389 515 IPR032675 -
Bva04g02182 885 ProSitePatterns Tyrosine protein kinases specific active-site signature. 727 739 IPR008266 GO:0004672|GO:0006468
Bva04g02182 885 Pfam Protein tyrosine and serine/threonine kinase 607 879 IPR001245 GO:0004672|GO:0006468
Bva04g02182 885 Gene3D Ribonuclease Inhibitor 288 388 IPR032675 -
Bva04g02182 885 SMART LRR_typ_2 444 467 IPR003591 -
Bva04g02182 885 SMART LRR_typ_2 204 227 IPR003591 -
Bva04g02182 885 SMART LRR_typ_2 323 347 IPR003591 -
Bva04g02182 885 SMART LRR_typ_2 107 130 IPR003591 -
Bva04g02182 885 SMART LRR_typ_2 83 106 IPR003591 -
Bva04g02182 885 SMART LRR_typ_2 131 154 IPR003591 -
Bva04g02182 885 SMART LRR_typ_2 371 395 IPR003591 -
Bva04g02182 885 SMART LRR_typ_2 155 179 IPR003591 -
Bva04g02182 885 CDD STKc_IRAK 610 882 - -
Bva04g02182 885 SUPERFAMILY L domain-like 259 510 - -
Bva04g02182 885 Pfam Leucine rich repeat N-terminal domain 38 57 IPR013210 -
Bva04g02182 885 Gene3D Phosphorylase Kinase; domain 1 570 682 - -
Bva04g02182 885 Pfam Leucine rich repeat 85 144 IPR001611 GO:0005515
Bva04g02182 885 Pfam Leucine rich repeat 325 384 IPR001611 GO:0005515
Bva04g02182 885 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE TYROSINE-PROTEIN KINASE PXC3 1 883 - -
Bva04g02182 885 Gene3D Transferase(Phosphotransferase) domain 1 683 885 - -
Bva04g02182 885 Gene3D Ribonuclease Inhibitor 63 287 IPR032675 -
Bva04g02182 885 SUPERFAMILY L domain-like 41 291 - -
Bva04g02182 885 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 883 - -
Bva04g02182 885 ProSiteProfiles Protein kinase domain profile. 604 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02182 885 SUPERFAMILY Protein kinase-like (PK-like) 603 882 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02182 Bva-Chr4 21009458 21013344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02182 1 884 Receptor kinase-like Gene Family AT2G41820 71.847 0.0 1282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva04g02182 PK_Tyr_Ser-Thr 3.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02182 - - gmx:100789684 1437.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02182 04 21009458 21013344 Bva04g02182 04 21009458 21013344 ECH