Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02163 ATGGAGAATGGTTCGAGAAGTAGGTTGCATGATCTTACTATGGCTTCAAGAAAAGCAGAAGAAGCAGTTTGGAGACGATATCAAGCTGCTCAATGGCTAGAAACCGAAGTGGGTCCGCTCGGAATATCCAGCAAGCCGTCAGAGAGAGAATTTATTTCTTGCTTGAGAAATGGTCTGCACCTATGCAATGCCATTAACAAGATACATCCAGGAGCAGTACCCAGGGTTGTGGATAATCAAGTACTTTCTCAATCACTTGCTCGAGATTCCCAGCCCTTGCCCGCCTACCAGTATTTCGAAAATGTCAGGAATTTTCTGGTGGCCGTTGAAGAATTAAAGCTGCCTGCCGTAGAAGCTTCAGATCTTGATCggGATAACCTAGAGGCAGGATCAGCAGCTAAGGTTGTTGATTGCATTTTAGGGCTCAAATTAAATCAAGAGTGGAAGCAGACAAACAATAAGAATGGATTCAACAAACACATAAAATCACCTTTAGTTACACGTTCTGCCAGTAGGATGCTCCCCAGAGCCTCAGCTGGATTCTCCTTGGATACCTGTAGGCACTTGGATATGTCTGCTACATCTGAAAAACAGCCTCCTCTTGAGGGTGATTCTCAGAACCGTGAAGCAGATTTGGTGGAGTTGATTGTCAAACAACTTGTTGACTGTATGAttgaaaccaaagaaaatattgatgtgGACGTTGCTGCTTCATATTGTAATGGCCAATTGGCGATGGATCCCATAAAGTTATTCAGTGGGATCGTGTCAAGTTGTTTGGGGGAAGAACTCCAGAAGAAGTTCCCTAAGTTGCCTTTGCTATTAAAGGATCTCACAAATGAAAGGAGCAACCTACACTCAACATCTGATTTATCTAAACCTGAATGTTATAAGTATTTTAGAGCTTCTGAAAACAAGGGTTCTCGTTACAATCAGCATCGCCTTCGCATGCAAGAAAAGGAACTCGAGGAGCTTAAGGATTTGATGctgaaaactaagaaagagtTAGAAGAGTTTCAGTcccagcttcaaagtgactTGAATAACCTTGGAAGTCATGTACAGAAAATGTCCTTCGATGCTCTAAGATACCATAAGCTAGTGAAGGAGAATAGGGACTTATACAATACCGTTCAAGATTTGAAAGgTAATATTCGAGTTTACTGCAGAATCAGGCCCTGCTTAAATGGTGAATCCAGTAATGTTATAGATTTCATAGGGGAGGATGGTTCCCTAGTGATGTCAGACCCactaaaaacacaaaaagatgGAAGGAAAGCTTTTCATTTCAATCGGGTTTTTGGTCCAACAGCTAGCCAAGCTGACATTTTTGAGGAGATTCAACCATTAATTAGATCAGTGATGGATGGTTACAATGTTTGTATTTTTGCTTATGGTCAAACTGGATCGGGGAAAACTTATACCATGAGTGGTCCCTCAGCTGGATCTTTTAGAGATGTGGGGATCAACTATCTAGCTCTCAACTATCTCTTCCAAATCTCCTCCCAAAGGAAGGAAACGATAAAGTACGagatttatattcaaatgGTGGAGATATACAACGAACAAGTGAGGGACCTATTGTCTGAGGAGGCTGTGATTAAATATCCTTTTCCTTAtgAGATTAGGAGTTGCAACGAGAATGGATTGAACCTTCCAGATGCCACATTGCAGCCTGTCAAGTCCTCAACTGATGTTCTGAGTCTCATGAAACTTGGTGAGGTCAATAGAGCTGTTAGTTCCACTGCTCTGAATAACAGGAGTAGTCGTTCacacagTGTCTTGACTGTGCATGTCCACTGCAAAGACAAATCTGGAAGCACCACAAGGAATTGTCTGCACTTGGTAGACCTTGCAGGAAGTGAGCGCGTAGACAAATCTCAAGTTACTGGGGAAAGGTTGAAGGAAACCCAGTACATAAACAAGTCTCTTGCTTGTTTGGGGGATGTGATAACAGCCTTGGCTCAAAAGAATTCTTACATACCTTTCAGAAATAGCAAACTTACACTTCTCTTGCAGGACTCTTTAGGTGGACATGCCAAAACATTAATGTTTGCTCATGTGAGTCCTGAAGAAGTCTCTTTTGGTGAAACTGTCAGTACCTTGAAGTTTGCCCAGCGGGCTTCCACTGTGGAACTAGGGGTAGCTCGTGTGAATAAGCAAAGCAGTGAAGTCATGCAACTCAAAGGAGAGATTGAGAAGCTAAAGAAGCAATTGGCGGACAAGGAGGCACAGAGAACTCCATATCAGAAATTAAATGTGGTACCCGAGAAGACTCCATTGAGTTCCAGAAGACTAAGCATTGAGAATTCTGGCATCACGATGACTGACAGATTTATGAATGGTGAGGATGGAAATGACAAGAAATCACCCTGCACCATCCCAACCCGGCCAAGACGATTAAGCTTGGAAGGCGCAAAAAGTGCCAAGAAAGACAAACTGAAGCAAAATGTATCAGTGGCAATGCAAGATATTGAAGCTACGTCAAGGCTATATGGCCATTATAGCAATGGCAATTCTGAGTTGCATGCTAATGCTCCTCGGAGTCCtaccaattttatttatccaaAGAGACTGCAAAAAATAGATGGTTCGACACAAATTGCTTCTCTGAAGCTACTTCACACACCTATAAACGGTGCAAAAAGAGCTCCAAAGGGTGACTTGGCACATTCCACCGATTGTGAGACGACGCCAAATGTGATCAGCACCGGCACAAATGGAAAAGGATCACAAATAAGAAAATCCTTAAGGACAATAGGAAAGTTTATCACTGGGCCTGAGAAGAGGAACCAACAAAATTTGGTTGAAGCAAGGTCACCACCACCCATCAAGGGAAGCCATATAAATGATGGGAAATCACCAGCAACAGGTACTGCAAGGCCAAATAGGAGGCAATCTCTAACAGGCATTCAAACATCAGGATCCCGAAGATCTTCTCTTGGAGGAAAGTCAACATTCTCTAATGAGAATGACATTCGAAGTGTAAGAACCCCTCCGCCAGTTTCCTCAGCCAGCAAAACAAAACGCTGGGTATA 3038 0.4131 MENGSRSRLHDLTMASRKAEEAVWRRYQAAQWLETEVGPLGISSKPSEREFISCLRNGLHLCNAINKIHPGAVPRVVDNQVLSQSLARDSQPLPAYQYFENVRNFLVAVEELKLPAVEASDLDRDNLEAGSAAKVVDCILGLKLNQEWKQTNNKNGFNKHIKSPLVTRSASRMLPRASAGFSLDTCRHLDMSATSEKQPPLEGDSQNREDLVELIVKQLVDCMIETKENIDVDVAASYCNGQLAMDPIKLFSGIVSSCLGEELQKKFPKLPLLLKDLTNERSNLHSTSDLSKPECYKYFRASENKGSRYNQHRLRMQEKELEELKDLMLKTKKELEEFQSQLQSDLNNLGSHVQKMSFDALRYHKLVKENRDLYNTVQDLKGNIRVYCRIRPCLNGESSNVIDFIGEDGSLVMSDPLKTQKDGRKAFHFNRVFGPTASQADIFEEIQPLIRSVMDGYNVCIFAYGQTGSGKTYTMSGPSAGSFRDVGINYLALNYLFQISSQRKETIKYEIYIQMVEIYNEQVRDLLSEEAVIKYPFPYEIRSCNENGLNLPDATLQPVKSSTDVLSLMKLGEVNRAVSSTALNNRSSRSHSVLTVHVHCKDKSGSTTRNCLHLVDLAGSERVDKSQVTGERLKETQYINKSLACLGDVITALAQKNSYIPFRNSKLTLLLQDSLGGHAKTLMFAHVSPEEVSFGETVSTLKFAQRASTVELGVARVNKQSSEVMQLKGEIEKLKKQLADKEAQRTPYQKLNVVPEKTPLSSRRLSIENSGITMTDRFMNGEDGNDKKSPCTIPTRPRRLSLEGAKSAKKDKLKQNVSVAMQDIEATSRLYGHYSNGNSELHANAPRSPTNFIYPKRLQKIDGSTQIASLKLLHTPINGAKRAPKGDLAHSTDCETTPNVISTGTNGKGSQIRKSLRTIGKFITGPEKRNQQNLVEARSPPPIKGSHINDGKSPATGTARPNRRQSLTGIQTSGSRRSSLGGKSTFSNENDIRSVRTPPPVSSASKTKRWV 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02163 1011 ProSiteProfiles Calponin homology (CH) domain profile. 23 147 IPR001715 GO:0005515
Bva04g02163 1011 SMART kinesin_4 381 718 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva04g02163 1011 PRINTS Kinesin heavy chain signature 456 477 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva04g02163 1011 PRINTS Kinesin heavy chain signature 660 681 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva04g02163 1011 PRINTS Kinesin heavy chain signature 581 598 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva04g02163 1011 PRINTS Kinesin heavy chain signature 611 629 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva04g02163 1011 Pfam Calponin homology (CH) domain 25 143 IPR001715 GO:0005515
Bva04g02163 1011 PANTHER KINESIN-LIKE PROTEIN KIN-14L 5 999 - -
Bva04g02163 1011 ProSiteProfiles Kinesin motor domain profile. 383 710 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva04g02163 1011 Pfam Kinesin motor domain 389 709 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva04g02163 1011 SUPERFAMILY Calponin-homology domain, CH-domain 23 154 IPR036872 -
Bva04g02163 1011 MobiDBLite consensus disorder prediction 951 1004 - -
Bva04g02163 1011 MobiDBLite consensus disorder prediction 922 1011 - -
Bva04g02163 1011 Coils Coil 717 744 - -
Bva04g02163 1011 Coils Coil 314 348 - -
Bva04g02163 1011 Gene3D Kinesin motor domain 378 751 IPR036961 -
Bva04g02163 1011 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 383 745 IPR027417 -
Bva04g02163 1011 PANTHER KINESIN-LIKE PROTEIN KLP-3 5 999 - -
Bva04g02163 1011 Gene3D - 15 147 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02163 Bva-Chr4 20895527 20902942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02163 319 746 Calmodulin-binding Proteins AT5G65930 38.565 5.74e-72 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02163 K10406 - qsu:112015123 1164.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02163 04 20895527 20902942 Bva04g02163 04 20895527 20902942 ECH