Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02153 ATGGCGAACTACGACCTAACTCCACGGATCGCGCCGAACCTGGACAGGCATCTCGTGTTCCCTCTTTTGGAGTTTCTTCAGGAACGCGAACTCTACGAGGACGACCAGATCCTCAAGGCTAAGATTGAGCTTCTTAACAAGACCAACATGGTCGACTACGCCATGGACATCCACAAGAGCCTCTACCACACTGAAGACGTTCCTCAAGACATGATCGAAAGGAGAGCGGAGGTTGTGGCCAGGCTTAAGGCTTTGGAAGAGGCTGCAGCACCGCTTGTTGTCTTCCTGCAAAACGCGGCTGCGGTGCAGGAATTGAGGGCTGACAAGCAGTATAATATTCAAATGCTCAAGGAAAGATACCAGATTGGTCCTGAGCAAATAGAGGCATTGTATCAATATGCCAAATTTCAGTTTGAGTGTGGAAACTACTCTGGCGCTGCTGATTATCTTTATCAGTACAGGGCTCTATGCACAAATAGTGAAAGGAGTCTGAGTGCATTATGGGGAAAGCTGGCAGCTGAGATTTTGATGCAAAATTGGGATATTGCTCTTGATGAGCTGAATCGTTTGAAGGAAATTATTGATTCAAAGAACTTTTCATCACCGTTGAATCAGGTGCAAAGCAGAATATGGTTGATGCACTGGAGTCTATTCATCTTTTTCAACCATGACAATGGACGAACACAGATTATTGATCTGTTTAATCAGGATAAGTATCTAAATGCCATTCAAACCAGTGCTCCACACCTTTTACGATATTTGGCCACAGCATTCATTGTCAACAAGCGCAGGAGGCCTCAATTCAAAGAGTTTGTAAAAGTTATTCAACAAGAGCAGCATTCATACAATGACCCCATTACCGAGTTTTTGGCTTGTGTTTATGTCAACTATGACTTTGATGGAGcacaaaagaagatgaaggagTGTGAAGAAGTAATTCTCAATGATCCCTTCCTTGGTAAACTACTTGAAGAAGGCAACTTTTCTACCGTACCATTAAGGGATGAGTTTCTTGAAAATGCACGGCTATTTATCTTTGAGACATATTGCAGAATACACCACCGCATTGACATGGGaGTTCTTGCTGAGAAATTAAATCTGAATTACGAGGAGGCTGAGAGGTGGATTGTGAATCTAATCCGTAGCTCAAAGCTAGATGCCAAAATTGACTCTAGAACTGGGACTGTTATTATGGAGCCCAATCAGCCAAATGTGTATGAGCAGCTTATTGACCATACCAAGGCTCTTTCGGGCCGTACTTACAAGTCAGTCAGTCAACTTCTGGAACATGCACAAGCTCAGGGACAGGCTATTCGTTG 1319 0.4306 MANYDLTPRIAPNLDRHLVFPLLEFLQERELYEDDQILKAKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMIERRAEVVARLKALEEAAAPLVVFLQNAAAVQELRADKQYNIQMLKERYQIGPEQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERSLSALWGKLAAEILMQNWDIALDELNRLKEIIDSKNFSSPLNQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTSAPHLLRYLATAFIVNKRRRPQFKEFVKVIQQEQHSYNDPITEFLACVYVNYDFDGAQKKMKECEEVILNDPFLGKLLEEGNFSTVPLRDEFLENARLFIFETYCRIHHRIDMGVLAEKLNLNYEEAERWIVNLIRSSKLDAKIDSRTGTVIMEPNQPNVYEQLIDHTKALSGRTYKSVSQLLEHAQAQGQAIR 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02153 439 Hamap Eukaryotic translation initiation factor 3 subunit E [EIF3E]. 2 429 IPR016650 GO:0003743|GO:0005737|GO:0005852
Bva04g02153 439 Pfam PCI domain 285 399 IPR000717 -
Bva04g02153 439 Pfam eIF3 subunit 6 N terminal domain 5 137 IPR019010 -
Bva04g02153 439 Gene3D - 227 433 - -
Bva04g02153 439 SMART eIF3_N_2 5 137 IPR019010 -
Bva04g02153 439 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 1 435 IPR016650 GO:0003743|GO:0005737|GO:0005852
Bva04g02153 439 SUPERFAMILY "Winged helix" DNA-binding domain 332 404 IPR036390 -
Bva04g02153 439 ProSiteProfiles PCI domain profile. 219 403 IPR000717 -
Bva04g02153 439 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 332 416 - -
Bva04g02153 439 PIRSF Transl_init_eIF3e 1 439 IPR016650 GO:0003743|GO:0005737|GO:0005852
Bva04g02153 439 SMART PINT_4 332 416 IPR000717 -
Bva04g02153 439 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 1 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02153 Bva-Chr4 20850059 20853427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02153 3 435 Eukaryotic Initiation Factors Gene Family AT3G57290 87.529 0.0 807
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02153 K03250 - cpap:110807170 826.239