Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02145 ATGGCAAAGTGGAAGTGTTGGTTTAGATGGACGAAAAGGCTCCTCACTTCTGAGCCAAAGGAAAAAAAGCCAAAGAAATGGAGATGGGGTCTTGGGAGGTTTAAGCTGAGGTATTGTCCCACACTTACAGCACCAAATAAAACACTAACTGAAGCAATAGCAGAACAGAGAAAGCATGCTTTGAATGTGGCCATTGCAACGGCAGCTGCTGCAGAGGCGGCGGTTgccgctgcccatgctgctgCTGAGGTTGTGCGGCTCACAGGTGCTTCTGGTTCTGACCAATATCTGTCCAAGGGAAACAGAAACTTGGCAGCCATAAAGATTCAAAGTGCATATCGTGCACATCTTGCTAGGAAAGCGTTACGAGCATTGAAGGGTGTTGTGAGACTTCAAGCTATAATTCGTGGCGAAGCTGTGAGACGCACTTTGAAGCATTTGCCTTCCAATGCAAGAAAGCAGGTGGAAATCCAGGAAAGTAGTCATACTGCAGATGGAAGCTGCAAACTTGACAAGATGAAGCAGTGTGCTAAGCAAAAAGAGAAGTtggaagagaaggaaatgaagCCCGAATGCCATAGTCAAAGAACTTGGGATTGCAGCTTGCTCTCAAAAGAAGACATTGAAGCCATATGGTTGAAGAAGCAAGAGGCCTCTGTCAAAAGAGAGCGCATGAGGCAGTACTCATTCTCTCACAGGGAGAGAATAATTTCCCACATGGTAGAAGAATCTGTACTCAATAAGGAATTTGGTAGAGATAGAAGCCACACTCTACAAGAATGGCTGGATAAAGAAACATGTACCAGGGATCTGTTTCACAAACCAGCTCTTCCTTCAAACCTGATTACTAGGGAAGTATATGGTACAACACAATTTGCAGAGAAGAATGTAAGAAGAGAATATTCACAAGAAGAATTGAATCCACAAACTTCACTCCCAAGGAAgtcattttctcatttaaagAGAAGTTTAGTTGGTGACGATAGCTCAATGCCAAATTCTCCAATTTTTCCCAGTTACATGGCTGTGACAGAATCTGCTAAAGCAAAGGCAAGGTCTATGAGCACACCAAGACAAAGAACAGGAATTCTGGATATATGTACTAACCAGAGTGAGCCTCAACAAGAGGGTATATCGTTTTGGTCATCTAACTATAATGGGACAGCCAGCACCAATGGAAACAGTGAAGTTTCTGAGCAGAGATGTCACAGTGCAAATTGCGGTGCTAGAAGATGTTG 1238 0.416 MAKWKCWFRWTKRLLTSEPKEKKPKKWRWGLGRFKLRYCPTLTAPNKTLTEAIAEQRKHALNVAIATAAAAEAAVAAAHAAAEVVRLTGASGSDQYLSKGNRNLAAIKIQSAYRAHLARKALRALKGVVRLQAIIRGEAVRRTLKHLPSNARKQVEIQESSHTADGSCKLDKMKQCAKQKEKLEEKEMKPECHSQRTWDCSLLSKEDIEAIWLKKQEASVKRERMRQYSFSHRERIISHMVEESVLNKEFGRDRSHTLQEWLDKETCTRDLFHKPALPSNLITREVYGTTQFAEKNVRREYSQEELNPQTSLPRKSFSHLKRSLVGDDSSMPNSPIFPSYMAVTESAKAKARSMSTPRQRTGILDICTNQSEPQQEGISFWSSNYNGTASTNGNSEVSEQRCHSANCGARRC 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02145 412 Gene3D - 100 153 - -
Bva04g02145 412 PANTHER IQ-DOMAIN 12 1 395 - -
Bva04g02145 412 Pfam IQ calmodulin-binding motif 105 123 IPR000048 GO:0005515
Bva04g02145 412 ProSiteProfiles IQ motif profile. 102 130 IPR000048 GO:0005515
Bva04g02145 412 SMART iq_5 101 123 IPR000048 GO:0005515
Bva04g02145 412 SMART iq_5 124 145 IPR000048 GO:0005515
Bva04g02145 412 PANTHER IQ-DOMAIN 5-RELATED 1 395 - -
Bva04g02145 412 Pfam Protein of unknown function (DUF4005) 328 396 IPR025064 -
Bva04g02145 412 ProSiteProfiles IQ motif profile. 126 153 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02145 Bva-Chr4 20803047 20805454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02145 1 407 IQD Protein Family AT5G03960 43.499 8.44e-75 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02145 - - gmx:100800767 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02145 04 20803047 20805454 Bva04g02145 04 20803047 20805454 ECH