Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02130 ATGACCATGTCCCTTGAAGACTCTCTGAGATCTCTGTCGTTGGATTACCTTAACCTGCTCATCAATGGCCAAGCCTTCAGCGACGTCACCTTCAGCGTGGAGGGTCGTTTGGTTCACGCCCACCGCTGCATCCTCGCTGCTCGAAGCCTCTTCTTCAGGAAATTCTTCTGTGGACCAGACCCGCCTTCTGGGCTCGACCCGGCCGGGACACGGGTCAGCTCGGCCTCGTCTACGTCACGGTCTGGCCTTGGGACTGGGGTCATACCCGTTAACTCGGTGGGTTACGAGGTCTTCCTGTTGCTTCTCCAGTTCTTGTACAGTGGCCAAGTCTCTATTGTTCCCCAGAAGCACGAGCCGAGGCCTAATTGTGGAGAGAGAGGGTGCTGGCACACGCATTGCACCTCAGCCGTTGATCTTGCCCTCGACACTCTCGCTGCCGCTAGATATTTTGGTGTTGAACAGCTCGCATTGCTCACCCAGAAACAATTGGCTAGCATGGTAGAGAAGGCCTCAATTGAAGATGTAATGAAAGTGCTTTTGGCTTCAAGAAAGCAAGACATGCACCAGCTCTGGACCACTTGTTCCCACCTTGTTGCAAAATCAGGTCTCCCCCCTGAAGTCCTCGCCAAGCACCTTCCCATTGACATTGTCGCCAAGATCGAAGAGCTTCGTCTCAAATCCTCCCTCGCACGCCGCTCTCTATTGCcacaccaccaccaccaccaccaccatcacGATCTCGGCGCCGCCGCAGACCTTGAGGACCAGAAAATCCGACGAATGAGACGAGCCCTTGACTCCTCCGATGTGGAACTTGTCAAGCTCATGGTAATGGGAGAAGGGCTCAATCTAGACGAAGCATTGGCGCTACATTATGCCGTGGAAAATTGTAGCCGTGAGGTTGTGAAAGCGTTGCTAGAACTAGGTGCAGCCGATGTTAACTACCCAGCTGGTCCAGCAGGGAAAACCCCGCTTCACATCGCCGCCGAAATGGTGTCTCCGGACATGGTGGCAGTGCTTCTCGACCACCACGCCGACCCCAATGTCCGTACGGTTGATGGGGTGACCCCACTAGACATCCTCAGAACCCTAACCTCGGATTTCCTCTTCAAAGGTGCTGTCCCTGGTCTCACACACATCGAACCAAACAAACTGAGGCTGTGTTTGGAACTCGTTCAATCTGCAGCACTTGTGCTTTCACGCGAAGAAGGCAATGCCAACCCTCCTTCTTCCGCCCCCATATATCCTCCAATGAGCGAAGACCACAGCAGCAGtagcagcagcaacaacatTGCCAACCTTAACCTCGATTCTAGGTTGGTTTACCTGAACCTTGGTGCCAGCCAATTGGGTGCAGGTGGAGACGATGACAACAACCAAAATAGCCAGAGAGAAGCCATGGCTCGCCATGGAACGCATTCGCAAGCTGGTTTGGACCCAACAATGCCTTTCAATGGTCACCATTTGAAGTGCAGTTTCATAGGAGATGGGATAAGAAGAGACAAGGAGAATCTATTCAGTTTATTTTTGctgtg 1535 0.5121 MTMSLEDSLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPAGTRVSSASSTSRSGLGTGVIPVNSVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLASMVEKASIEDVMKVLLASRKQDMHQLWTTCSHLVAKSGLPPEVLAKHLPIDIVAKIEELRLKSSLARRSLLPHHHHHHHHHDLGAAADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGNANPPSSAPIYPPMSEDHSSSSSSNNIANLNLDSRLVYLNLGASQLGAGGDDDNNQNSQREAMARHGTHSQAGLDPTMPFNGHHLKCSFIGDGIRRDKENLFSLFLL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02130 511 Pfam BTB/POZ domain 18 116 IPR000210 GO:0005515
Bva04g02130 511 PANTHER REGULATORY PROTEIN NPR5 3 465 - -
Bva04g02130 511 SMART BTB_4 27 167 IPR000210 GO:0005515
Bva04g02130 511 MobiDBLite consensus disorder prediction 402 430 - -
Bva04g02130 511 Gene3D Potassium Channel Kv1.1; Chain A 3 200 IPR011333 -
Bva04g02130 511 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 3 465 IPR044284 GO:0099402
Bva04g02130 511 MobiDBLite consensus disorder prediction 453 469 - -
Bva04g02130 511 Pfam Domain of unknown function (DUF3420) 202 262 IPR024228 -
Bva04g02130 511 ProSiteProfiles Ankyrin repeat profile. 320 352 IPR002110 GO:0005515
Bva04g02130 511 Gene3D - 250 368 IPR036770 -
Bva04g02130 511 ProSiteProfiles BTB domain profile. 27 114 IPR000210 GO:0005515
Bva04g02130 511 CDD BTB_POZ_NPR_plant 10 167 - -
Bva04g02130 511 SUPERFAMILY POZ domain 10 165 IPR011333 -
Bva04g02130 511 SUPERFAMILY Ankyrin repeat 279 363 IPR036770 -
Bva04g02130 511 MobiDBLite consensus disorder prediction 451 479 - -
Bva04g02130 511 Pfam Ankyrin repeats (3 copies) 268 350 IPR002110 GO:0005515
Bva04g02130 511 ProSiteProfiles Ankyrin repeat region circular profile. 320 350 - -
Bva04g02130 511 SMART ANK_2a 285 315 IPR002110 GO:0005515
Bva04g02130 511 SMART ANK_2a 320 349 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02130 Bva-Chr4 20705055 20708268 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bva04g02130 BTB 2.9e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02130 K14508 - zju:107433767 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02130 04 20705055 20708268 Bva04g02130 04 20705055 20708268 ECH