Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02115 ATGGGAATAGCTACAGAGTCCCAGTTTCATGTATTGGCTGTTGATGACAGCTTAATAGATAGGAAGCTAATTGAGAGGCTGCTCAGAACCTCTTCTTATCAAGTTACTACCGTTGATTCTGGTAGCAAGGCTTTAGCGTTTCTGGGCTTGCGTGAGAATGACCAGAGCAACCCAGACACACCATCTGTTTCCCTTAAAAATCATCAGGAAGTTGAGGTGAATCTTGTTATTACAGACTACTGTATGCCTGGCATGACAGGCTATgatttactcaaaaaaatcAAGGAATCTTCATCCTTGAGAAACATCCCAGTAGTTATTATGTCATCCGAGAATGTGCCTTCGAGGATTACCAGATGCTTGGAGGAAGGAGCGgaagaatttttcttgaaacCAGTGAGGCCAGCAGATTTGAATAGGCTTAGATCCCATATGATGAAGACAAAGTTGAAGGAACAAATGCAAGAAGCACAAGAAAAGCTTGAAAACCCAGAAGTTCAGCAACAAGAAGAGCAACAGCAACGACAAAACGAAAATAACCAGCAACAACCACTACAAGAACAAGAGCAGCAAGCACTTCCACAGGCCAACAATAACAAGAGAAAGACCATGGAACAGGGGCTTTCACCTGAGACTGACAGAACAAGACCAAGATACAATGGAATAGCTACTGTAGTCTG 680 0.4118 MGIATESQFHVLAVDDSLIDRKLIERLLRTSSYQVTTVDSGSKALAFLGLRENDQSNPDTPSVSLKNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFLKPVRPADLNRLRSHMMKTKLKEQMQEAQEKLENPEVQQQEEQQQRQNENNQQQPLQEQEQQALPQANNNKRKTMEQGLSPETDRTRPRYNGIATVV 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02115 226 MobiDBLite consensus disorder prediction 150 226 - -
Bva04g02115 226 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 222 IPR045279 GO:0009736
Bva04g02115 226 SMART REC_2 9 142 IPR001789 GO:0000160
Bva04g02115 226 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Bva04g02115 226 Pfam Response regulator receiver domain 11 139 IPR001789 GO:0000160
Bva04g02115 226 MobiDBLite consensus disorder prediction 167 205 - -
Bva04g02115 226 CDD REC_typeA_ARR 11 141 - -
Bva04g02115 226 Gene3D - 10 216 - -
Bva04g02115 226 SUPERFAMILY CheY-like 8 179 IPR011006 -
Bva04g02115 226 MobiDBLite consensus disorder prediction 150 166 - -
Bva04g02115 226 Coils Coil 147 183 - -
Bva04g02115 226 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 4 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02115 Bva-Chr4 20641596 20643611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02115 1 226 Response Regulator Gene Family AT3G57040 64.706 2.63e-98 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva04g02115 Response_reg 7.3e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02115 K14492 - gmx:100814494 307.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02115 04 20641596 20643611 Bva04g02115 04 20641596 20643611 ECH