Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02105 ATGGCTAGCATCAACAGTGATAAAAGTTCTGAATATTTCTTGGATCACAACGATGACGATAGTGATCAGGACATTGAGGCTAGCAAGTCTGATAGCGGCGATAGTAACGGCGATGAGCAAAATCCTAATCCACCGCTTGAGACTTTCCGTTCTCAGCAATGGCCACAAAGTTACAGACAAGCTGCTGATTCTCTCACAATTGCTGCATCACCAAGTCTTCATGCTGCGGTTCTACGAACACCAAGTATGATATATTCAAGCTTCGTGGGTcctttaaaaagtaatttcgACTTAGATGCAAAGGCTCCTTTCCTGTCTGGTATGGGAAGCACTACCCAAATGCCGAAGGATGGATGGGGTAGGTTCTCAAGAGCACAATCATCATGGTATGAGCAATCTACATTGCATGAGCAACTTACTGAAGAACTGCCCATTGGTCATGGATGTAGCTTAACTCAAACTGTTTTCAATgGGATTAATGTGATGGCTGGAGTTGGCCTTTTGTCTACACCTTATACAGTGAAACAAGCTGGGTGGGCAGGCTTGATGGTGCTGCTTCTTTTTGCACTTGTATGTTACTATACGGCCATACTTATGAAGCAGTGCTTTGAAAGTAGAAAAGGAATCATGAGCTACCCAGATATAGGGGAAGCAGCATTTGGAAGATATGGCCGTCTTATTATATCAATCATTTTGTACGTTGAATTATATTCATACTGTGTGGAATTTATCATCTTGGAAGGAGATAACCTTACTAGGCTGTTTCCTGGAACATCTCTGGACTGGGGTGTTCTCCAGTTAGACTCCAAGCACTTGTTTGGAATTTTGACTGCACTTGTTATTCTCCCCACTGTTTGGTTGAAGGATCTTCGTTTTATCTCCTATCTTTCAGCTGGAGGGGTCATTGCAACAGTTCTGATTATTCTCTGTGTGTTCTTTGTTGGGGCGGTAGAAGGCGTTGGATTCCACCACACTGGTCACATTGTGAATTGGAGTGGCATCCCATTTGCTATTGGTGTCTACGGGTTTTGTTATTCAGGACATTCAGTTTTTCCAAATATTTACCAGTCTATGGCTAACAAAAGACAATTTACACAGGCATTAGGAAtatgTTTTGTTTTGTGCGTTTTAATGTATGGAGGTACTGCAGTCCTGGGATATCTCATGTTTGGTGAAACTACTGTGTCtcaaataactttaaatttgCCACCACACAGTTTCGGTGCCAAAGTTGCATTATGGACAACAGTAATTAATCCGTTCACTAAATATCCTTTTGGCCACTTCTTTACTTGTGTTACGAATGAACATGATAGTTACTGGTGTTTCTTGCTTCTTAGAACTGTGCTTGTGGTGTCTACAGTTTGTGCTGCCTTTCTGATTCCTTTTTTTGGGCTTATGATGGCTTTAATTGGTTCGCTTCTCAGTATACTTGTGGGAGTGATAGTGCCAAGTTTATGTTTCCTGAGAATTGTGGGGAAAAAAGCTACAACAACACAGACTGCTATGAGTATCGCGATTGTCGCAGTGGGAGCCGCTGCTGGAGTCCTTGGGACATATTCTTCCTTCTCCGTGAATGAGAATAACAAGTGGTCGTTTCATAAAGGAAAAGGTGCAAAAGGGTCGACAAGTTCCCATTTTTTGACAAGAGACAGATATAGAAATCCAGAAATGTCTGAATTGGTTGCTCGTACCGGTCGTCACCAACAACGTTACGAGGCCGGTTGTCGCCTTATCGCCGGGTGTATTCCCTTTAAGTATAAGAGATGTAATGAGAATAGTGATGGTACATCTGAAGAGACTTTGGAAGTTTTGATGATCAGCTCAACTAGTGGTCCCGGTCTTGTGTTTCCTAAGGGGGGATGGGAAAATGACGAGACCGTTGAGGAAGCTGCAGTTCGAGAAGCTGTAGAAGAGGCTGGAGTTCGAGGAGAACTATTGGATTTTCTAGGGTATTACGAATTTAAGAGTAAGACCCTGAAAGATGAGTTCTGTCCAGAGGGTTTATGCAAAGCTGCCATGTTTGCTTTGCTTGTGAAGGAGGAGCTCCAATTCTGGCCAGAACAAAGTACACGGCAGAGAAGTTGGCTACCCATCTCTGAAGCTTTGCACTCTTGCCGGCATGAATGGATGCGAAGTGCCCTTGAGGAAAGTTTTCTGAAATGGCATGCAGATCAGAACCAGATGGTGCGCACCACAAAGGAGGGCAATCATCTGATATCACCACACAACAATTG 2237 0.4269 MASINSDKSSEYFLDHNDDDSDQDIEASKSDSGDSNGDEQNPNPPLETFRSQQWPQSYRQAADSLTIAASPSLHAAVLRTPSMIYSSFVGPLKSNFDLDAKAPFLSGMGSTTQMPKDGWGRFSRAQSSWYEQSTLHEQLTEELPIGHGCSLTQTVFNGINVMAGVGLLSTPYTVKQAGWAGLMVLLLFALVCYYTAILMKQCFESRKGIMSYPDIGEAAFGRYGRLIISIILYVELYSYCVEFIILEGDNLTRLFPGTSLDWGVLQLDSKHLFGILTALVILPTVWLKDLRFISYLSAGGVIATVLIILCVFFVGAVEGVGFHHTGHIVNWSGIPFAIGVYGFCYSGHSVFPNIYQSMANKRQFTQALGICFVLCVLMYGGTAVLGYLMFGETTVSQITLNLPPHSFGAKVALWTTVINPFTKYPFGHFFTCVTNEHDSYWCFLLLRTVLVVSTVCAAFLIPFFGLMMALIGSLLSILVGVIVPSLCFLRIVGKKATTTQTAMSIAIVAVGAAAGVLGTYSSFSVNENNKWSFHKGKGAKGSTSSHFLTRDRYRNPEMSELVARTGRHQQRYEAGCRLIAGCIPFKYKRCNENSDGTSEETLEVLMISSTSGPGLVFPKGGWENDETVEEAAVREAVEEAGVRGELLDFLGYYEFKSKTLKDEFCPEGLCKAAMFALLVKEELQFWPEQSTRQRSWLPISEALHSCRHEWMRSALEESFLKWHADQNQMVRTTKEGNHLISPHNN 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02105 745 PANTHER AMINO ACID TRANSPORTER AVT1A 29 524 - -
Bva04g02105 745 ProSiteProfiles Nudix hydrolase domain profile. 575 719 IPR000086 -
Bva04g02105 745 Pfam Transmembrane amino acid transporter protein 149 522 IPR013057 -
Bva04g02105 745 MobiDBLite consensus disorder prediction 1 50 - -
Bva04g02105 745 ProSitePatterns Nudix box signature. 620 641 IPR020084 GO:0016787
Bva04g02105 745 CDD Nudix_Hydrolase_9 580 712 - -
Bva04g02105 745 MobiDBLite consensus disorder prediction 34 50 - -
Bva04g02105 745 PANTHER OS05G0424000 PROTEIN-RELATED 29 524 - -
Bva04g02105 745 Pfam NUDIX domain 603 715 IPR000086 -
Bva04g02105 745 MobiDBLite consensus disorder prediction 11 33 - -
Bva04g02105 745 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 562 719 - -
Bva04g02105 745 SUPERFAMILY Nudix 577 724 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02105 Bva-Chr4 20527077 20536378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02105 9 465 Amino Acid or Auxin Permease AAAP Family AT2G41190 59.529 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02105 K15015 - gmx:100790344 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02105 04 20527077 20536378 Bva04g02105 04 20527077 20536378 ECH