Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02103 ATGGGTAGTAGAACAGTAAACATTAACTCAGACGACACTAATAAGGTTGTCAACGGGATGCCGAGCTACGCGCCTTCCTTACCTACTTCAAGTGCCATtGGCATAGAAGGAACAACTGTTCAGCCTTCACGAATTTCTGAATTTGGAGCTCTTGAGCAATCTCTTGGATTTCGTGTAGAGGATGCTATCAATCTAAGCCGAAATCCAGTGTTCAGTCAAATGAAGTCGAATGGTCAAGCTGTAGGTGCTGATGTTCAATTTGGCAATTTAAATAAgTCAATAGCAACATCTGATATAAATCTCTTTGCTGCAACTGTGGAGTCTCAGACATTGGCATTGCAAAAAGACTCGCTAGCAAATCTGGCTTCTACATCTTCTGGCCGTGAGAACTGGGGGGAGACCAACATGGCAGATGCTAGCCCAAGGACTGATACTTCAACCGATGATACAGatgataaaaatcaaaagTCCGAAAGGGGTCAACTGGCTGCTGATTCCAGTGATAGATCAAAAGATAAATCAGATCAAAAGACATTACGAAGGCTAGCACAAAATCGTGAAGCTGCCAGAAAAAGTCGATTACGCAAAAAGGCATACGTGCAACAATTAGAGAGTAGCAGGCTGAAACTGACCCAACTTGAGCAGGAGCTTCAGCGGGCCCGCCAGCAGGGCATATTTATTTCAAGCACAGGAGATCAATCCCATTCAATGAGTGGAAATGGTGCTATGGCATTTGATGTGGAATATGCACGGTGGTTAGAAGAGCACAATAGGCAGATAAATGAGCTAAGGGCTGCAGTCAATTCACATGCTGGAGATATCGAACTTCGTACAATTGTTGACAATGTCATGACACAGTATGATGAGCTCTTCAGGCTGAAAGGCGTTGCTGCAAAAGCTGATGTTTTCCACATCCTGTCAGGAATGTGGAAGACCCCAGCTGAGAGGTGTTTCATGTGGATTGGAGGTTTCCGCTCATCTGAGCTTCTCAAGCTTCTTGTAAATCAATTGGAACCTTTGACCGAGCAACAATTAGTGGGCATCTACAACTTGCAGCAATCATCCCAGCAAGCTGAAGATGCTCTGTCCCAAGGAATGGATGCATTGCAGCAATCCCTTGCTGAGACATTGGCTAATGGTTCACCTAATCCATCAGGGTCGTCTGGAAATGTGGCAAATTATATGGGGCAGATGGCTATGGCCATGGGGAAGCTTGGTACCCTCGAGGGATTTCTTCGCCAGGCTGATAATCTGAGGCAGCAAACACTGCAACAAATGCTGCGGATATTGACAACCAGGCAATCAGCTCGAGCTCTTCTGGCAATAAGTGACTATTTCTCCCGGTTACGTGCACTAAGTTCTCTATGGCTAGCGCGGCCAAGGGAGTG 1388 0.4539 MGSRTVNINSDDTNKVVNGMPSYAPSLPTSSAIGIEGTTVQPSRISEFGALEQSLGFRVEDAINLSRNPVFSQMKSNGQAVGADVQFGNLNKSIATSDINLFAATVESQTLALQKDSLANLASTSSGRENWGETNMADASPRTDTSTDDTDDKNQKSERGQLAADSSDRSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSTGDQSHSMSGNGAMAFDVEYARWLEEHNRQINELRAAVNSHAGDIELRTIVDNVMTQYDELFRLKGVAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGSPNPSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02103 462 Pfam Basic region leucine zipper 173 219 IPR004827 GO:0003700|GO:0006355
Bva04g02103 462 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 66 462 - -
Bva04g02103 462 PANTHER TRANSCRIPTION FACTOR TGA9 66 462 - -
Bva04g02103 462 ProSiteProfiles DOG1 domain profile. 242 459 IPR025422 GO:0006351|GO:0043565
Bva04g02103 462 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 175 219 IPR004827 GO:0003700|GO:0006355
Bva04g02103 462 MobiDBLite consensus disorder prediction 122 179 - -
Bva04g02103 462 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 180 195 IPR004827 GO:0003700|GO:0006355
Bva04g02103 462 SMART brlzneu 173 236 IPR004827 GO:0003700|GO:0006355
Bva04g02103 462 CDD bZIP_HBP1b-like 177 229 - -
Bva04g02103 462 SUPERFAMILY Leucine zipper domain 177 220 IPR046347 GO:0003700|GO:0006355
Bva04g02103 462 Gene3D - 176 228 - -
Bva04g02103 462 MobiDBLite consensus disorder prediction 122 143 - -
Bva04g02103 462 Pfam Seed dormancy control 259 334 IPR025422 GO:0006351|GO:0043565
Bva04g02103 462 Coils Coil 253 273 - -
Bva04g02103 462 MobiDBLite consensus disorder prediction 144 179 - -
Bva04g02103 462 Coils Coil 196 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02103 Bva-Chr4 20509057 20515381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02103 136 462 bZIP Transcription Factor Family AT3G12250 77.946 0.0 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva04g02103 DOG1 1.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02103 K14431 - gmx:778136 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02103 04 20509057 20515381 Bva04g02103 04 20509057 20515381 ECH