Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02094 ATGCCTTACCTTGTCCGggagaatttatttattggtaatATTGGTGATGCAGCAGAGATCCTCCAAAGCGGAAGTGCTGAAATCACACATATTTTATCTGTTCTCAGCTCAGCATCAATATCATTCTTTTCAGAATGGCGTAATGGCCTAATGATCCCCACaaaggaaattaagaaagtTTATGTTGGTGGTAGTCATGGTACTACTAAAGATGATAATTTAGGTGATAGATCAAGGAGTCCCTTGTCACCGGAAAAGCTTCTGTACTCGTTGGAATATGCAGGAAGAGATTTGAAATTGGTTAGGATGGCTGTGCCTTTGAGGGATacagaaaatgaagatttgTTGGATTACTTGGAGGTTTGCCTCGATTTCATTGATCAGAGTAGAAAAGAAGGATCTATTCTGGTTCACTGTTTTGCTGGAGTATCTAGAAGTGCAGCAATCGTTACAGCATATTTGATGAGAACCGAACATCTATCTCAAGAAGATGCACTTGATTCTTTAAGACAGAGCTGTGAGTCTGTTTACCCCAATGATGGTTTTCTAGAGCAGtttaaaatgtttgaaGAGATGGGTTTCAAGGTAGATCATTCTAGCCCCATATACAAGCGTTTTCGTCTGAAAATACTTGGTGAGAATTATAACTCGGGATTGGGAATCGACAGTTCTAAACTTGGTGCAGATCCAGGTATACCTATTGAAACTGAGGTGGAAAGAGCTCCAAAAGTAGGAAATAATTGCATTCATACATATCGCTGTAAAAAGTGTCGACGGGTGGTTGCATTGCCAGAGCATGTTGTAGATCATATTCCAGGCGAAGGTGAGACATCCTTTGAGTGGCATAAGTGGAGAAGTGGCAACCCTTTTAGCAAGCCTAATGAATCCGAGTGTTCATCCATATTTATTGAGCCTCTACGATGGATGAAAGCTGTTGAGGAAGGTGCACTGGAGGGAAAGTTGTCCTGCGTTCATTGTGAAGCCCGTTTGGGATTCTTCAACTGGTCAGGCATACAGTGCAGTTGTGGAAGCTGGATAACCCCAGTTTTTCAGCTCCACAAAAGCCGAGTGGATATCAGCCCTGTCTG 1088 0.4035 MPYLVRENLFIGNIGDAAEILQSGSAEITHILSVLSSASISFFSEWRNGLMIPTKEIKKVYVGGSHGTTKDDNLGDRSRSPLSPEKLLYSLEYAGRDLKLVRMAVPLRDTENEDLLDYLEVCLDFIDQSRKEGSILVHCFAGVSRSAAIVTAYLMRTEHLSQEDALDSLRQSCESVYPNDGFLEQFKMFEEMGFKVDHSSPIYKRFRLKILGENYNSGLGIDSSKLGADPGIPIETEVERAPKVGNNCIHTYRCKKCRRVVALPEHVVDHIPGEGETSFEWHKWRSGNPFSKPNESECSSIFIEPLRWMKAVEEGALEGKLSCVHCEARLGFFNWSGIQCSCGSWITPVFQLHKSRVDISPV 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02094 362 CDD DSP_DUSP12 4 197 - -
Bva04g02094 362 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 4 195 IPR029021 -
Bva04g02094 362 ProSitePatterns Tyrosine specific protein phosphatases active site. 137 147 IPR016130 GO:0016311|GO:0016791
Bva04g02094 362 ProSiteProfiles Dual specificity protein phosphatase domain profile. 1 195 IPR020422 GO:0006470|GO:0008138
Bva04g02094 362 PIRSF DUSP12 3 45 IPR016278 GO:0006470|GO:0008138
Bva04g02094 362 PIRSF DUSP12 93 362 IPR016278 GO:0006470|GO:0008138
Bva04g02094 362 Gene3D Protein tyrosine phosphatase superfamily 4 212 IPR029021 -
Bva04g02094 362 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 1 358 - -
Bva04g02094 362 Pfam Dual specificity phosphatase, catalytic domain 102 191 IPR000340 GO:0008138|GO:0016311
Bva04g02094 362 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 116 171 IPR000387 GO:0016311|GO:0016791
Bva04g02094 362 SMART dsp_5 1 192 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02094 Bva-Chr4 20466962 20471938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02094 100 191 Protein tyrosine phosphatase (PTP) family AT3G06110 38.710 1.72e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02094 K14819 - zju:107403964 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02094 04 20466962 20471938 Bva04g02094 04 20466962 20471938 ECH