Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02092 ATGGGACTCTGTCATGGAAAACCTATTGAAACCTCACAAATTCAAGGTGAAAACCCAGTATTTCCCGGTGACAATGACGGGTTGCCTAGTTCTCACACAGGCAAATCCTCAAACTTTCCATTCTACAGCCCAAGTCCCCTACCAAGTCTCTTTAAGAACTCGCCAGCAAACTCCAGCGTGAGCTCAACTCCTTTGCGCTTTTTCAAGCGTCCATTTCCTCCTCCTTCCCCGGCCAAGCACATTAGGGCACTGCTAGCTCGACGGCATGGTTCAGTGAAGCCCAATGAGGCCTCAATTCCTGAAGGCAGCGAATGCGAGGTAGGATTGGACAAAAATTTCGGTTTCTCAAAGCAGTTTGTGGCTCATTATGACCTTGGAGAAGAGGTAGGACGTGGGCATTTTGGGTATACTTGCTCAGCCAAGGGAAGGAAGGGAAGCTTGAAGGGGCAGGATGTGGCTGTCAAAATCATTCCAAAATCAAAGATGACAACAGCTATTGCTATAGAGGATGTACGAAGAGAAGTGAAAATATTGCGGGCTTTAACAGGACATAGGAACCTGGTGCAGTTCTATGAAGCTTATGAGGATGATGACAATGTTTATGTAGTTATGGAGTTATGCAAAGGAGGTGAACTGCTAGATAGGATACTTTCCAGGGGTGGTAAGTATTCTGAAGAGGATGCCAAGTTCGTTATGATTCAAATATTAAGTGTGGTGGCCTTCTGTCATCTTCAGGGTGTGGTTCATCGTGATCTCAAGCCTGAGaattttctttttacttctaAGGAGGAAAATTCTACGTTGAAGGCTATTGATTTTGGACTATCCGACTATGTAAAGCCAGATGAAAGATTGAATGACATTGTGGGAAGTGCATATTATGTAGCTCCCGAAGTTTTACATAGATCTTATGGGACAGAAGCTGACATGTGGAGCATTGGTGTGATTGCTTATATCCTTTTATGTGGAAGCCGACCCTTCTGGGCCCGAACAGAATCTGGCATATTTCGAGCTGTCTTGAAGGCAGATCCAAGTTTTGATGAAGCTCCTTGGCCTTCTTTATCTCCTGATGCAGTAGATTTTGTAAAAAGGCTGTTGAATAAGGATTACCGAAAAAGATTAACTGCAGCTCAGGCTCTTTGTCATCCGTGGCTGGTGAATCGTCAGGATGGTATAAAGATACCTTTGGATATGATAATTCACAAGCTTGTGAAAGCTTACATATGCTCATCGTCTTTACGCAAATCAGCATTAGGGGCTCTAGCAAAGACACTAACAGTAGCTCAGCTAGCTTATTTCAGAGAACAATTTACGTTGTTAGGGCCAAACAAAAGCGGACTTATTTCTATGCAGAACTTTAAGACGGCTGTTTTGAGGAGCTCAACTGACGCATCAAAAGACTCACGGGTCTTAGATTACGTTAGCATGGTTAGCTCCATCCAATataggaaattaaattttgaggaATTTTGTGCTGCTGCTATAAGTGTACATCAACTAGAGGGAATGGACAGCTGGGAGCACCATGCAACACGTGCCTATGAGCTATTTGAAAAGGATGGAAATAGACCAATTATGATTGAAGAGCTTGCTTCGGAACTTGGGCTTAGCCCGTCAGTGCCTGTTCATGTAGTACTCCAAGATTGGATTAGACACTCAGATGGGAAGCTTAGTTTCTTGGGGTTTGTCAGACTTCTGCATGGTGTTTCTTCCCGTACATTTCAGAAGGCTTG 1733 0.4316 MGLCHGKPIETSQIQGENPVFPGDNDGLPSSHTGKSSNFPFYSPSPLPSLFKNSPANSSVSSTPLRFFKRPFPPPSPAKHIRALLARRHGSVKPNEASIPEGSECEVGLDKNFGFSKQFVAHYDLGEEVGRGHFGYTCSAKGRKGSLKGQDVAVKIIPKSKMTTAIAIEDVRREVKILRALTGHRNLVQFYEAYEDDDNVYVVMELCKGGELLDRILSRGGKYSEEDAKFVMIQILSVVAFCHLQGVVHRDLKPENFLFTSKEENSTLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPDAVDFVKRLLNKDYRKRLTAAQALCHPWLVNRQDGIKIPLDMIIHKLVKAYICSSSLRKSALGALAKTLTVAQLAYFREQFTLLGPNKSGLISMQNFKTAVLRSSTDASKDSRVLDYVSMVSSIQYRKLNFEEFCAAAISVHQLEGMDSWEHHATRAYELFEKDGNRPIMIEELASELGLSPSVPVHVVLQDWIRHSDGKLSFLGFVRLLHGVSSRTFQKA 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02092 577 CDD STKc_CAMK 122 384 - -
Bva04g02092 577 SUPERFAMILY Protein kinase-like (PK-like) 121 401 IPR011009 -
Bva04g02092 577 Pfam Protein kinase domain 123 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02092 577 MobiDBLite consensus disorder prediction 1 40 - -
Bva04g02092 577 PANTHER CDPK-RELATED KINASE 1 26 572 - -
Bva04g02092 577 PANTHER SERINE/THREONINE-PROTEIN KINASE 26 572 - -
Bva04g02092 577 SUPERFAMILY EF-hand 415 568 IPR011992 -
Bva04g02092 577 ProSitePatterns Protein kinases ATP-binding region signature. 129 155 IPR017441 GO:0005524
Bva04g02092 577 Gene3D Phosphorylase Kinase; domain 1 116 212 - -
Bva04g02092 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Bva04g02092 577 Gene3D - 405 568 - -
Bva04g02092 577 SMART serkin_6 123 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02092 577 ProSiteProfiles Protein kinase domain profile. 123 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02092 577 Gene3D Transferase(Phosphotransferase) domain 1 213 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02092 Bva-Chr4 20461074 20465682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02092 1 575 EF-hand Containing Proteins AT3G50530 66.878 0.0 849
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva04g02092 Pkinase 4.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02092 - - mnt:21397814 1015.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02092 04 20461074 20465682 Bva04g02092 04 20461074 20465682 ECH