Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02086 ATGGCGAAGCGGTTGGTCCCGTTGCTCAATCGGGTTTTGGTAGAGAAAATCGTCCCTCCATCCAAAACCAACTCTGGGATTCTATTCCCAGAGAAATCCACCAAgCTGAATTCTGGAAGGGTTATTGCTGTCGGTCCTGGCATTCGTGATAAGGAGGGGAAGATTATCCCGGTGACCGTGAAGGAAGGTGACACTGTCCTGTTACCTGAATATGGAGGGACTGAGGTGAGGCTTGGTGATAAAGAtGGTGATTTTTATCAGAGAAGGTATCATCTGTTTCGAGATGATGATATACTGGGAACACTGCACGAGTG 314 0.4745 MAKRLVPLLNRVLVEKIVPPSKTNSGILFPEKSTKLNSGRVIAVGPGIRDKEGKIIPVTVKEGDTVLLPEYGGTEVRLGDKEYHLFRDDDILGTLHE 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02086 97 Pfam Chaperonin 10 Kd subunit 5 94 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bva04g02086 97 CDD cpn10 4 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bva04g02086 97 Gene3D GroES chaperonin 1 97 IPR037124 GO:0006457
Bva04g02086 97 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 97 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bva04g02086 97 PANTHER GROES-LIKE FAMILY PROTEIN 1 97 - -
Bva04g02086 97 SUPERFAMILY GroES-like 3 96 IPR011032 -
Bva04g02086 97 ProSitePatterns Chaperonins cpn10 signature. 5 29 IPR018369 GO:0005524|GO:0006457
Bva04g02086 97 SMART Cpn10_2 4 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bva04g02086 97 PRINTS 10kDa chaperonin signature 82 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bva04g02086 97 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bva04g02086 97 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bva04g02086 97 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02086 Bva-Chr4 20420243 20421778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02086 3 96 Calmodulin-binding Proteins AT5G20720 39.583 2.00e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02086 K04078 - ncol:116262110 178.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02086 04 20420243 20421778 Bva04g02086 04 20420243 20421778 ECH