Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02081 ATGGCTTCAAGACCCGTTGTTCCGCCGCAGGCCACCAGAGGTGAGGGAGTGATTGGGGGAGCTAAGCAGCAGAAGAAGAATGGTGCAGCCGAGGGAAGAAATCGCAAAGCACTAGGTGATATTGGAAATCTGGTTACCGTTAAAGGAATAGAAGTCAAGCCTAACCGCCCCATCACGAGgagCTTCTGTGCCCAATTACTTGCAAATGCGCAAGCTGATGCAGTTGCTGAAAATAACAAGAAAAAGGCTTGTCCTAACGTGGTTGGAGCCCCTCCGGTCCAGGATGGGGCTGCTGCAGTTGCTAAGAGACCTGTGGCACCTAAAGCAGCTGAGAAGAAAGTCACTGTTAAACCAAAGCCTGAGGAAGTTATTGAAATAAGCTCAGACAAAGAGGTTAAGCCGGAGAAGTGTgtgaacaagaaaaaggaagaaggaaacTCCAAGAAGAAATCTCATACTCTTACTTCAGTTCTCACAGCTCGAAGCAAGGCAGCGTGTGGTTTGACCAAAAAAGCAAAGGACCAAATTATTGACATTGATGCAGCTGACGCTGATAATGAGCTTGCTGCCGTGGAATATATTGAAGACATCTACAAGTTCTATAAGCTGGTGGAGAATGAGAACCGCCCACATGATTACATGGACTCACAGCCTGAAATTAATGAAAGGATGAGAGCTATATTGGTTGATTGGTTGGTAGATGTGCACAGCAAGTTTGACCTTTCGCTTGAAGCTCTTTATTTGACTATAAACATCATTGATCGTTTCCTTGCAATTAAGACTCTGCCAAGGAGGGAGCTGCAATTGGTTGGCATCAGTGCCATGTTAATGGCTTCCAAGTACGAAGAAATCTGGCCCCCTGAGGTTAATGACTTTGTGTGCCTTTCAGACAGAGCCTACACCCATGAACAGATACTGGTGATGGAGAAAATCATACTGGGCAATTTGGAATGGACTTTGACTGTGCCTACACCTTATGTGTTCCTTGTTCGTTTCATCAAGGCATCAATTCCTGATCAAGAAtTGGAAAACATGGTCCACTTTCTTTCTGAGCTGGGAATGATGCAATACGCAACCATAATGTATTGCCCATCAATGTTTGCTGCCTCAGCAGTCTTTGCTGCTCGATGCACTCTGAATAAGAACCCTGCTTGGAGTGATACACTCAAGTTACACACTGGTTATTCAGAAGAACAGCTGATGGATTGTGCTAGACTATTAGTGGGCTTCCACTCCATGGCCGGGAATGGAAAGCTTCAGGTTGTGTACAGAAAATACTCTGATCCCAAGAGAGGAGCTGTCGCTCTGCTTCCACCGGCTAGGAATCTCCTTCCTGGTTGTGCTGCTAATAGACAAGGCAATTG 1364 0.4487 MASRPVVPPQATRGEGVIGGAKQQKKNGAAEGRNRKALGDIGNLVTVKGIEVKPNRPITRSFCAQLLANAQADAVAENNKKKACPNVVGAPPVQDGAAAVAKRPVAPKAAEKKVTVKPKPEEVIEISSDKEVKPEKCVNKKKEEGNSKKKSHTLTSVLTARSKAACGLTKKAKDQIIDIDAADADNELAAVEYIEDIYKFYKLVENENRPHDYMDSQPEINERMRAILVDWLVDVHSKFDLSLEALYLTINIIDRFLAIKTLPRRELQLVGISAMLMASKYEEIWPPEVNDFVCLSDRAYTHEQILVMEKIILGNLEWTLTVPTPYVFLVRFIKASIPDQELENMVHFLSELGMMQYATIMYCPSMFAASAVFAARCTLNKNPAWSDTLKLHTGYSEEQLMDCARLLVGFHSMAGNGKLQVVYRKYSDPKRGAVALLPPARNLLPGCAANRQGN 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02081 454 SUPERFAMILY Cyclin-like 185 320 IPR036915 -
Bva04g02081 454 CDD CYCLIN 321 408 IPR013763 -
Bva04g02081 454 PANTHER CYCLINS 22 446 IPR039361 -
Bva04g02081 454 SMART cyclin_7 230 314 IPR013763 -
Bva04g02081 454 SMART cyclin_7 327 409 IPR013763 -
Bva04g02081 454 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 22 446 - -
Bva04g02081 454 CDD CYCLIN 224 313 IPR013763 -
Bva04g02081 454 Pfam Cyclin, C-terminal domain 323 439 IPR004367 -
Bva04g02081 454 Pfam Cyclin, N-terminal domain 196 320 IPR006671 -
Bva04g02081 454 SMART Cyclin_C_2 323 440 IPR004367 -
Bva04g02081 454 SUPERFAMILY Cyclin-like 322 440 IPR036915 -
Bva04g02081 454 PIRSF Cyclin_A_B_D_E 1 451 IPR039361 -
Bva04g02081 454 Gene3D - 210 321 - -
Bva04g02081 454 Gene3D - 196 436 - -
Bva04g02081 454 MobiDBLite consensus disorder prediction 1 34 - -
Bva04g02081 454 ProSitePatterns Cyclins signature. 225 256 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02081 Bva-Chr4 20379217 20382000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02081 1 449 Core Cell Cycle Gene Families AT4G37490 53.863 1.72e-152 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02081 K21777 - gmx:547919 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02081 04 20379217 20382000 Bva04g02081 04 20379217 20382000 ECH