Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02080 ATGAGGGACGACGACACTAATTGGTTCTCGAGATGGGAAGAGGAACTCCCTTCCCCTGAGGAACTCACGCCGCTGTCTCAAACCCTAATCACTCCTGATCTTGCTTTGGCTTTTGATATCGGAAACCCACACGGTAATAGCCCACAACAAATCCCACAACCACCACCTCCTTCCAATCCCTTGCCTTCTCCTGGAAATCCCAACCAACCCACTTCAGCTGAATTTGCAGATTCAGCTGAGTTGGGTTCTGGGACTGGTGGTGAGGAACCCGCTCGCACCCTCAAGCGACCTCGTCTTGTTTGGACTCCGCAACTTCATAAGAGGTTTGTCGACGCTGTGGCACATTTGGGGATAAAAAATGCTGTGCCCAAGACCATAATGCAGCTCATGAGTGTCGACGGGTTGACCAGGGAAAACGTGGCTAGTCATTTGCAAAAATACCGGCTTTATCTCAAGCGCATGCAAGGACTGTCCGGCGGAAGTGGTGGTGGTAGTGGCGGTGGGGGAGGAACTGGAGGTGGACTGGCTGCCAGCGCTGATCCTGCCACTGACCATTTATTTGCGAGTTCTCCTGTTCCCCCTCATTTCTTGCATCCGGCGCGTCCCAATTCAGACCATTTCTTGCCGTTTATGCCAGTACAGAGTCTGCAGCACCACCATCACCAGCAGCAGATGGCGGCTGCCGCAGCTGTCGCCGCCCATCCTCAATTGCAGCCACAGTATCATAGGCAGGTGGGACATTTTGGGTCACCTCCAAATGGGCATTTTGAGCATCATTTCTTGACTAGGCAGTCTCAGCCGCTTCATAGGATTGGGGCGCCGGTTCACAATGCAGTACCTGGTTATGTAGAGGACATGGAATCAGCTAATGCAGCAGGAGGAAGAAAGGTTCTTACTTTATTTCCAACTGGAGATGATTG 920 0.5228 MRDDDTNWFSRWEEELPSPEELTPLSQTLITPDLALAFDIGNPHGNSPQQIPQPPPPSNPLPSPGNPNQPTSAEFADSAELGSGTGGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGSGGGSGGGGGTGGGLAASADPATDHLFASSPVPPHFLHPARPNSDHFLPFMPVQSLQHHHHQQQMAAAAAVAAHPQLQPQYHRQVGHFGSPPNGHFEHHFLTRQSQPLHRIGAPVHNAVPGYVEDMESANAAGGRKVLTLFPTGDD 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02080 306 MobiDBLite consensus disorder prediction 1 95 - -
Bva04g02080 306 SUPERFAMILY Homeodomain-like 93 153 IPR009057 -
Bva04g02080 306 Pfam Myb-like DNA-binding domain 100 148 IPR001005 -
Bva04g02080 306 Gene3D - 93 155 - -
Bva04g02080 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 152 IPR017930 -
Bva04g02080 306 PANTHER HOMEODOMAIN-LIKE PROTEIN-RELATED 1 306 - -
Bva04g02080 306 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 306 IPR044841 GO:0003700|GO:0006355
Bva04g02080 306 MobiDBLite consensus disorder prediction 48 67 - -
Bva04g02080 306 MobiDBLite consensus disorder prediction 1 18 - -
Bva04g02080 306 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 97 149 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02080 Bva-Chr4 20363284 20365715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02080 1 306 G2-like Transcription Factor Family AT3G10760 57.618 1.03e-97 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva04g02080 Myb_DNA-binding 2.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02080 - - cpap:110811289 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02080 04 20363284 20365715 Bva04g02080 04 20363284 20365715 ECH