Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02075 atggaaggtGAAGGATTTTATCAGAGATGCAAGCCTTACATAGCCATGATCTCTCTCCAATTTGGTTACGCTGGGATGAACATAATCACAAAGGTTTCCCTCAACCGAGGAATGAGCCATTACGTGCTTGTTGTATATAGGCATGCTTTTGCTACAGCAGCAATTGCTCCCTTCGCTCTTGTTCTAGAGAGAAAAGTGAGGCCCAAGATGACTTTTCTCATGTTCATGCAAATCTTTGTGTTGGGTCTCCTCGGACCTGTGATTGATCAGAACTTATACTATGCTGGGTTGAAATTTACTTCACCATCCTACGCATGTGCTATAAGCAACATGCTCCCTGCAATGACTTTTGTGATGGCACTTATTTGCAGAATGGAGAAGGTGGACATGAGAAAAGTTAGATGTATAGCAAAGGTGATTGGAACGGTAGTAACAGTTGCTGGGGCTATGTTAATGACATTGTACAAAGGAGAAGTAATCAACTTTTTCTGGTCCCAGTACATGCATCAGCCTAGAAATTATGCACCTGCTGCTGGCACCAATGGTTCCGAGGACAGAGACTGGGTTAAGGGTTCCATCTTTCTCATAATAGCTACCTTAGCTTGGGCTTCTTTCTTTATCCTTCAGGCTGTGGCGTTGAAGAGATACTCAGCTCAGCTCTCACTCACAGCACTAGTGTGTTTTCTGGGCACTCTGCAGTCAACTGCAGTAGCCTTTGTCGTGGAACACAAGGCCTCTGTTTGGTCCATTGGTTGGGACTTGAATCTGCTAGCAGCTGCCTATGCCGGTATTGTTTCATCAGGCATTGCCTACTATGTTCAAGGGATTGtgatgaagaaaagagggCCTGTGTTCGTTACTGCTTTCAGCCCTTTGATGATGATCATCGTCGCCATCATGGGCTCTTTCATGCTAGCTGAGAAGATCTATCTTGGAGGAGTCATTGGTGCCGTACTAATTGTGATAGGTCTTTACTCGGTTCTCTGGGGGAAATACAAAGAgcacaaagagaaagaaactgAGATAATCATCGCAGATGGAATTAAGGGCTCCACAGAGAATGGGAGAATGGCAACTGTGATGGAAGgtattgaagaagaaaatgacattgAGATGCAAAATGGTGAAGCTAGTAAGGAGCCAAGCACTTCAGCTTGCAGAAACCATTA 1169 0.4217 MEGEGFYQRCKPYIAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFALVLERKVRPKMTFLMFMQIFVLGLLGPVIDQNLYYAGLKFTSPSYACAISNMLPAMTFVMALICRMEKVDMRKVRCIAKVIGTVVTVAGAMLMTLYKGEVINFFWSQYMHQPRNYAPAAGTNGSEDRDWVKGSIFLIIATLAWASFFILQAVALKRYSAQLSLTALVCFLGTLQSTAVAFVVEHKASVWSIGWDLNLLAAAYAGIVSSGIAYYVQGIVMKKRGPVFVTAFSPLMMIIVAIMGSFMLAEKIYLGGVIGAVLIVIGLYSVLWGKYKEHKEKETEIIIADGIKGSTENGRMATVMEGIEEENDIEMQNGEASKEPSTSACRNH 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02075 389 PANTHER WAT1-RELATED PROTEIN 8 366 IPR030184 GO:0016021|GO:0022857
Bva04g02075 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
Bva04g02075 389 MobiDBLite consensus disorder prediction 375 389 - -
Bva04g02075 389 PANTHER WAT1-RELATED PROTEIN 8 366 - -
Bva04g02075 389 MobiDBLite consensus disorder prediction 369 389 - -
Bva04g02075 389 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020|GO:0016021
Bva04g02075 389 Pfam EamA-like transporter family 13 153 IPR000620 GO:0016020|GO:0016021
Bva04g02075 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02075 Bva-Chr4 20331872 20333774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02075 4 363 Nodulin-like Gene Family AT5G07050 66.213 4.24e-173 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02075 - - gmx:100793545 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02075 04 20331872 20333774 Bva04g02075 04 20331872 20333774 ECH