Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02058 ATGATATATGGGTGTGGTCCATCCTGTCAGTGCCCTCCTAATTGCCGGAACCGGATGTCCCAAGGTGGCTTGAAAGTTAGATTTGAGGTGTTTAGAACTAAGGATGGAGGTTGGGGTCTAAGATCCTGGGATCCTATTCGTGCCGGAGCTTTCATTTGTGAGTATGCAGGAGAAGTCATTGATAATGCTAGAGTAGAGGAACTTggtgaaaatgaagatgattacattttttattcaaccCGTGTTTATCAACAACTGGAAATCTTCCCTAGTGATACCGAAGCTCCTAAAATCCCACACCCTCTGTATATAACAGCAAAAGATGTTGGGAATGTATCTAGATTTATGAACCATAGCTGCTCACCGACAGTATTCTGGCGTCCAATCTTACGCGAAAACAAGAATCAGTGTGATCTTCACATTGCTTTTCATGCAATCAGACATATTCCTCCTATGATGGAGCTGACGTTTGATTATGGGACAGTTGTTCCTCTCAAAGCAGaccagaagaaaaataaatgcttaTGTGAATCAGAGAAATGCCGGGGTTACTTTTGTTG 560 0.3911 MIYGCGPSCQCPPNCRNRMSQGGLKVRFEVFRTKDGGWGLRSWDPIRAGAFICEYAGEVIDNARVEELGENEDDYIFYSTRVYQQLEIFPSDTEAPKIPHPLYITAKDVGNVSRFMNHSCSPTVFWRPILRENKNQCDLHIAFHAIRHIPPMMELTFDYGTVVPLKADQKKNKCLCESEKCRGYFC 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02058 186 Gene3D SET domain 1 185 IPR046341 -
Bva04g02058 186 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 1 185 - -
Bva04g02058 186 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 1 185 - -
Bva04g02058 186 Pfam SET domain 37 160 IPR001214 GO:0005515
Bva04g02058 186 ProSiteProfiles Post-SET domain profile. 170 186 IPR003616 -
Bva04g02058 186 SUPERFAMILY SET domain 1 183 IPR046341 -
Bva04g02058 186 ProSiteProfiles SET domain profile. 26 160 IPR001214 GO:0005515
Bva04g02058 186 SMART set_7 26 166 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02058 Bva-Chr4 20222435 20225348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02058 1 185 Su(var)3-9 homologs AT1G73100 51.244 1.03e-64 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bva04g02058 SET 8e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02058 K24405 - gmx:100805932 327.791