Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02053 ATGAATAGGACTGGTCTGCTTGTATCAGATTTTGTCTTGTCATTCATGCGGGTATGGGCAGGTGTTCTTATTAAGATATTTGTGGGCAGAAAGTTGGGTTTGGATCATGAGATTTTGAAGGCTGCATTTTCCATTCTAAACTCGTTCCTCTTTGCGTTTCTGGCAAGAATCACCAATGGTGGTGCCTATAATCCTCTCCATGTTTTGGTTCCTGCTATTTCTGGGGATTTCGCCAACTTCATTTACTGCATTTCTGCCAGAATCCCTGTTCAGGTTAGTTTCTTGCTGCTGCTTTTATG 299 0.4214 MNRTGLLVSDFVLSFMRVWAGVLIKIFVGRKLGLDHEILKAAFSILNSFLFAFLARITNGGAYNPLHVLVPAISGDFANFIYCISARIPVQVSFLLLLL 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02053 99 PANTHER AQUAPORIN SIP2-1-RELATED 1 92 IPR044226 GO:0015267
Bva04g02053 99 PANTHER AQUAPORIN SIP2-1-RELATED 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02053 Bva-Chr4 20207311 20207610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02053 1 92 Major Intrinsic Protein MIP AT3G56950 48.454 1.69e-24 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02053 K09875 - pvy:116138856 115.546