Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02042 ATGTATCATACAAAGAAGTTTTCAACGGGAACCGTAGTGCCACATAAAGCTCAaggtagtagtagtagtagtgaACAACTTGCAAATATTGGGGTTTTGGCTGGATCTGCGGTAAAAAATGCCACTCCTGCTGGGGGAAGTGGGAAACAGCGGTTGCGGTGGACATCTGATCTTCATGACCGCTTTGTGGATGCCATTACACAACTTGGTGGAGCCGATAGGGCAACACCAAAAGGTGTTCTGAGAGTGATGGGTGTACCTGGACTTACTATTTATCACGTCAAAAGCCATCTACAGAAATATCGCCTTGCAAAGTATCTGCCTGAATCTTCAGCTGATGATAAAGATTCTaaagatgagaaaaagaaTTCTGAAGACAGCGTTTCTGGCACAGATTCTTCCCCGGGATTGGAAATAAATGATGCTTTGAGAATGCAGATGGAGGTTCAGAAACGTCTTCATGAACAACTAGAGGTTCAAAGGCAGTTACAAATGAGAATTGAAGCACAGAGTAAATACTTGCAAAAGATCATAGAAGAACAGCAGAAACTAGGTTGTACCTCGAGTGATTCGGAGACAGTAGCATCCAAAGATAATCATGATCCTTCTCAATCCGAGCCCCCTGTTGATGTCTCTGCGGGGACCTTGTCTCCGttaaagaaacagaaaattgaTGATGGTTCAAAGGACAGTTTCACTGCTTCAGAGGTGCCAACAAAGACTTCTCAGGAAACTGGTTTTGCTGGTCAGTTGGACCCAAACCTGTA 767 0.4146 MYHTKKFSTGTVVPHKAQGSSSSSEQLANIGVLAGSAVKNATPAGGSGKQRLRWTSDLHDRFVDAITQLGGADRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESSADDKDSKDEKKNSEDSVSGTDSSPGLEINDALRMQMEVQKRLHEQLEVQRQLQMRIEAQSKYLQKIIEEQQKLGCTSSDSETVASKDNHDPSQSEPPVDVSAGTLSPLKKQKIDDGSKDSFTASEVPTKTSQETGFAGQLDPNL 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02042 255 PANTHER OS05G0491500 PROTEIN 3 243 - -
Bva04g02042 255 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
Bva04g02042 255 MobiDBLite consensus disorder prediction 110 127 - -
Bva04g02042 255 MobiDBLite consensus disorder prediction 232 255 - -
Bva04g02042 255 MobiDBLite consensus disorder prediction 185 255 - -
Bva04g02042 255 Pfam MYB-CC type transfactor, LHEQLE motif 138 183 IPR025756 -
Bva04g02042 255 SUPERFAMILY Homeodomain-like 48 103 IPR009057 -
Bva04g02042 255 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 243 IPR044848 GO:0003700
Bva04g02042 255 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 106 IPR017930 -
Bva04g02042 255 MobiDBLite consensus disorder prediction 1 24 - -
Bva04g02042 255 Gene3D - 48 107 - -
Bva04g02042 255 MobiDBLite consensus disorder prediction 110 138 - -
Bva04g02042 255 Coils Coil 140 160 - -
Bva04g02042 255 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02042 Bva-Chr4 20159668 20163058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02042 47 228 G2-like Transcription Factor Family AT3G04450 48.387 1.31e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva04g02042 Myb_DNA-binding 3.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02042 - - gmx:100783132 350.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02042 04 20159668 20163058 Bva04g02042 04 20159668 20163058 ECH