Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02026 ATGGGGGTGCCTCCTTGCTGTGACAAAGCTGGCATCAAGAAGGGTCCATGGACACCTGAGGAGGATATCATCCTTGTTTCTTACATCCAAGAACACGGCCCAGGAAATTGGAGATCAGTGCCAACCAAAACTGGGTTGTTAAGGTGCAGCAAAAGTTGCAGGCTTAGATGGACTAACTACCTCAGACCAGGAATCAAGAGAGGCAACTTTACTCCCCATGAGGAAGGGATGATAATTCACCTGCAAGCACTATTGGGTAACAAATGGGCAGCCATAGCTTCCTACCTTCCACAAAGAACAGATAATGACATAAAGAACTATTGGAACACCCatttgaagaagaagctgaagaaatTTCAAGCAGCTTTGGACCCCCACCTGCCATCAGACTTAACAACTACTCGTCAGTTTTTAAATAAGAGCTTTAATGATAGAAGAGGTAATTTAGACGTCAGCAGCAGCTTTCCCTCCTCCCTTAGGCCTAGTCAGTCTTCCACTACCACCTATGCCTCAAGCGCTGAGAATATCTCGAGGCTTTTAGAAGGTTGGATGAGGTCTTCTCCAAAGCCAGATACCCTTAATCTCAAAGGCAGCCTACAAGAGAaagaacttcaaaaatatGACGACTTGGAAAACAATAAGCTGGTAAAGTCTGCATCAATGCCTGTTTTTGAGTCTTTCCAAGCCAAAGTTGAGCAAGAAGGTGGAGGGGGTGCTGATGAGAAAGTTCAAGATATAGCAGAGAGGAATAAGCAAAGATCTGAGAACAGCAGTACTCCTCCATTGTCATTTATTGAGAAGTGGCTCCTGGATGAGAATGTTGGTCAAGTAGGGGAGATGATGGAGTTGTCTCCTATGTTCTA 863 0.4334 MGVPPCCDKAGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTKTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQAALDPHLPSDLTTTRQFLNKSFNDRRGNLDVSSSFPSSLRPSQSSTTTYASSAENISRLLEGWMRSSPKPDTLNLKGSLQEKELQKYDDLENNKLVKSASMPVFESFQAKVEQEGGGGADEKVQDIAERNKQRSENSSTPPLSFIEKWLLDENVGQVGEMMELSPMF 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02026 287 CDD SANT 69 112 IPR001005 -
Bva04g02026 287 MobiDBLite consensus disorder prediction 235 252 - -
Bva04g02026 287 CDD SANT 16 61 IPR001005 -
Bva04g02026 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Bva04g02026 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Bva04g02026 287 MobiDBLite consensus disorder prediction 149 171 - -
Bva04g02026 287 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva04g02026 287 SMART sant 66 114 IPR001005 -
Bva04g02026 287 SMART sant 13 63 IPR001005 -
Bva04g02026 287 MobiDBLite consensus disorder prediction 231 262 - -
Bva04g02026 287 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva04g02026 287 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bva04g02026 287 PANTHER TRANSCRIPTION FACTOR MYB60 1 277 - -
Bva04g02026 287 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva04g02026 287 Gene3D - 13 66 - -
Bva04g02026 287 Gene3D - 69 136 - -
Bva04g02026 287 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bva04g02026 287 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02026 Bva-Chr4 20068217 20069917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02026 1 119 MYB Transcription Factor Family AT5G62470 89.076 4.53e-79 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva04g02026 Myb_DNA-binding 5.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02026 K09422 - zju:107433002 361.303