Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02021 ATGAGTTCCCATCTCGTCACTTACGATTTCGACGGTTTCAGAGGAAAAATGAGCCTTTTACCTCCTCAACCTCCTTTTTCTAACGCTTTTGGGGTGATGGGTTGTGCTGGTCAGATAGATTCTAACAAGACTGAACTGGGTTTTCAGATTCTGAGTCCTTCGTTTAATCCAGAAGAGAGTAGGGGAAGAAAGAGAACCAACGACGAAGGTGATGGGTACTTAGGAGCTGAGAAAAAGAGCTTGTCTTTGAAACTTGGTGTGGAAGCGGAAGCAAAGAGCTCTGCCATCGTCAAAAATGGTCACACCAAGCTTTGTGCCAGAGGTCACTGGAGGCCAGCTGAAGACGCCAAACTCAAAGAGCTAGTAGCTCAGTATGGCCCTCAAAACTGGAACTTGATCGCTGACCATCTCGAAGGAAGATCAGGAAAAAGTTGCAGATTGAGGTGGTTTAATCAGCTAGATCCTAGAATCAGCAGAAGGGCTTTCTCCGatgaagaagaggagaagCTCTTGTCTGCTCATAAACTGTATGGAAACAAATGGGCAATGATTGCTAGGCTCTTCCCTGGGAGGACTGATAATGCAGTGAAGAACCACTGGCATGTGATCATGGCAAGGAAGCACAGAGAGCAATCAAGTATTTATAGGAGGAGAAAGCCCAACAAAAACAACACTGAAAACCTTCCGAAGGGTCTAAATTTGGCTTTAACAAACAATGCAGGCAGTGAATCAACCATGTCAAGTACCATAGATGAATCTGCCTCAACCTGCACTAATTTATCACTCACTCCCTCTTCATCGAAACAGCCAGCTATGGGTTTTCCTAATCTGAGTCCAGTGATAGGGTCGTGTGGAGAAAGAGTGGTGACAGTGGGGGATATGGGTTTTGATAAGTTGTTTGATGGACCCATGTGGAAAGCCGTGGGTTTTGACCAATCTGGTTATTCAGATTCGAACTCAGAAGTCTCAGTATCGGAATCAGTTGCCACCAACAGGACCAATCTCTCAATTTCTGGGGAAAGTGAAAATGTGGGTAATAAGGTTAGCTTGGCATTCATTGATTTTCTTGGAGTAGGAGCTACATA 1085 0.4415 MSSHLVTYDFDGFRGKMSLLPPQPPFSNAFGVMGCAGQIDSNKTELGFQILSPSFNPEESRGRKRTNDEGDGYLGAEKKSLSLKLGVEAEAKSSAIVKNGHTKLCARGHWRPAEDAKLKELVAQYGPQNWNLIADHLEGRSGKSCRLRWFNQLDPRISRRAFSDEEEEKLLSAHKLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKHREQSSIYRRRKPNKNNTENLPKGLNLALTNNAGSESTMSSTIDESASTCTNLSLTPSSSKQPAMGFPNLSPVIGSCGERVVTVGDMGFDKLFDGPMWKAVGFDQSGYSDSNSEVSVSESVATNRTNLSISGESENVGNKVSLAFIDFLGVGAT 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02021 361 MobiDBLite consensus disorder prediction 58 73 - -
Bva04g02021 361 Gene3D - 160 230 - -
Bva04g02021 361 SMART sant 106 155 IPR001005 -
Bva04g02021 361 SMART sant 158 206 IPR001005 -
Bva04g02021 361 CDD SANT 161 201 IPR001005 -
Bva04g02021 361 ProSiteProfiles Myb-like domain profile. 107 153 IPR001005 -
Bva04g02021 361 Gene3D - 107 158 - -
Bva04g02021 361 ProSiteProfiles Myb-like domain profile. 154 204 IPR001005 -
Bva04g02021 361 PANTHER OS08G0435700 PROTEIN 74 361 - -
Bva04g02021 361 MobiDBLite consensus disorder prediction 53 73 - -
Bva04g02021 361 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 154 208 IPR017930 -
Bva04g02021 361 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 153 IPR017930 -
Bva04g02021 361 PANTHER MYB PROTEIN-RELATED 74 361 - -
Bva04g02021 361 Pfam Myb-like DNA-binding domain 159 202 IPR001005 -
Bva04g02021 361 Pfam Myb-like DNA-binding domain 107 153 IPR001005 -
Bva04g02021 361 CDD SANT 110 151 IPR001005 -
Bva04g02021 361 SUPERFAMILY Homeodomain-like 107 200 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02021 Bva-Chr4 20041121 20043260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02021 106 219 MYB Transcription Factor Family AT1G69560 85.965 1.50e-70 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva04g02021 Myb_DNA-binding 4.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02021 K09422 - jre:109000849 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02021 04 20041121 20043260 Bva04g02021 04 20041121 20043260 ECH