Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02020 ATGGAAGATCAGGGCCAGGGCCAGAGCCAGAGCGAGGACCCCAATAGTCCAAAACAAGGCAATGGTTCCGAGAGAACCACTGAACCGGTGAGGTCGAGGTGGACTCCAAAGCCAGAGCAAATACTCATACTCGAGTCCATCTTCAACAGTGGCATGGTCAATCCTCCCAAGGACGAAACCGTCAGAATAAGAAAGCTCCTTGAGAAATTTGGAACTGTTGGTGATGCCAACGTCTTCTACTGGTTCCAAAACCGCCGCTCGAGATCCCGCCGCCGGCAGCGGCAGATGCAGGCCACCCTTGAGCAGAGAAACAACCAGCTTCAGCCTCAAGTTGGCGGTGCAATTCCGTACGATCAAACCAACCCCGCTACTGCACCTGTGTCTTTTGCTGCTTCCAGCTCATCTTTTACTGATTCATCACCTTCTTATAATCTTCCCGGCTCTTCTTCCTCAGCCGCCGGCGGTGGTCTTCCGGGCCAAGAATCCATGGATGGACTCTTTTCATTCTCTCCTCAAATGGGTTTCCCCGAAATTGACCACACTTCTGCTGCAGCATCAGCTTTATACCCTTCTGATGCTGCAAATTTGAGCTACCAATCTGGATTCATCACAGTGTTTATCAATGGGGTTGCAACAGAAGTTCCAAGAGGCCCAATAGACATAAAAGCAATGTTTGGTCAAGATGTAATGTTAGTCCATTCCTCAGGACTTCCAGTTCCTGTCAATGAGTTTGGTTTCTTGATGCAGAGCTTGCAGCATGGTGAAAGCTACTTTCTGATATCAAAGCCAACTTA 794 0.4924 MEDQGQGQSQSEDPNSPKQGNGSERTTEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGTVGDANVFYWFQNRRSRSRRRQRQMQATLEQRNNQLQPQVGGAIPYDQTNPATAPVSFAASSSSFTDSSPSYNLPGSSSSAAGGGLPGQESMDGLFSFSPQMGFPEIDHTSAAASALYPSDAANLSYQSGFITVFINGVATEVPRGPIDIKAMFGQDVMLVHSSGLPVPVNEFGFLMQSLQHGESYFLISKPT 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02020 264 SMART HOX_1 29 96 IPR001356 GO:0003677
Bva04g02020 264 MobiDBLite consensus disorder prediction 1 36 - -
Bva04g02020 264 MobiDBLite consensus disorder prediction 86 119 - -
Bva04g02020 264 Gene3D - 31 99 - -
Bva04g02020 264 MobiDBLite consensus disorder prediction 98 119 - -
Bva04g02020 264 ProSiteProfiles 'Homeobox' domain profile. 27 92 IPR001356 GO:0003677
Bva04g02020 264 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 263 IPR044558 GO:0003700|GO:0048830
Bva04g02020 264 MobiDBLite consensus disorder prediction 1 29 - -
Bva04g02020 264 Pfam Homeodomain 31 91 IPR001356 GO:0003677
Bva04g02020 264 SUPERFAMILY Homeodomain-like 26 98 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02020 Bva-Chr4 20036108 20037923 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02020 1 260 Wox Gene Family AT3G03660 52.555 1.67e-72 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bva04g02020 Homeodomain 1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02020 - - lang:109335690 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02020 04 20036108 20037923 Bva04g02020 04 20036108 20037923 ECH