Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02015 ATGGTGTATTGTATTCACTGTATGCAAAATGTTATTGGAATGCGACCGGACGATGCTGCCTTGTCGTGTAACTTGTGTGGGAGAGTGTTGGAAGACTTCAATTTTTCCTCAGAGCCCACATTTGTGAAAAGTGCATCCGGGCAGAGCCAATTGTCAGGCCGTTATATTAGAACCATTCAAAGTGAATACTCGGCTTCACGTCAAAGGACATTAGATAGAGCTTCTGATGAGATGAGATATATATGTTTGAGCCTTGGAGTTGAAGATGCTAGTTTGATCAATCAGGCGTTGGCTTTTTACAAAATAGCAATTGAGCGGAATTTCACTAGAGGACGTAAATCAGAGCAAGTACAGGCAGCTTGTCTCTACATTGCATTCCGGGAGAATGATAAACCATACCTTCTTATTGATTTTTCCAATTATTTGAGGACAAATGTCTATATCCTGGGTGCCGTTTTTTTACAGCTTTGTAAAGTGTTaaggctggaagagcacccgATTGTCCAAAAGCCTGTTGATCCtagtctttttatttataaatttacaaataATCTGTTAAAGCATAGGAACATTCCTGTCTCTGAAACCGCACTGAGCATTGTTGCCAGCATGAAACGTGACTGGATGCAGACAGGGAGAAAACCTAGCGGGTTATGTGGTGCAGCATTGTACATATCTGCTCTTGCACATGGCATTAAGTGCTCTAAGTCGGACATtCTAAGAATTGTGCATGTATGTGAAGCAACATTAACAAAGCGGTTGGTGGAGTTTGAGAACACAGAATCTGCAAGCTTGACAATTGAGGAGTTGAATATGATGGCAAAAGAGCGTGAAAAAGATCAGATTGAAAAACCAAATGGTGCATCTGGAGAATGTGCCTCAAAAGATCTACTGTGCGAACACAGAGATAGTGGTGTGGCTTATTTTGCACTTGGATTGTGCGAACAATGTTATAAAGatTTTGTAAACCTTTCTGGAGGACTTGATGGTGGTATGGATCCTCCTGCCTTCCAGCGCGCCGAGAAGGAGAGAATGTCAAAACCACTTTCCGAGGAGAATGCTGATGAATTTAATGACTTGGAAAATGCATCAAATAGtgcttctgcaaaaggaaaagaagaattacATGCCTCTGAGCCAGAAAGCAGTGGGGCTGATGTTGAGCATATGGCTGCTAAAGATGGTGGGTTTGATGAATCACACAGAGATGATGATACAAGTGAAAAAACTCATGATGAATCAGATAGTCTTTCTGATATTGATGATCTGGAGGTTGATGGCTACCTCCATAATGAGGAGGAGAAGAAATTTAAGAAGATTATATGGGAAGAAATGAACCGGGAGTACCTTGAGgAGCAAGCAGCCAAGGAAGCTGCTGCCGCAGCTGCTAAGGAAGCTTTTGAGGCTAATTTTCAGAACTGTTCTGAGGATGTGCTGGCAGCAAGAGAGCTTGCCGCATCTGCAATTGCAGCTGTGGCAAAATCTAGGAAGGAGAAGAAACTGCGACGAGCTGAAGAGGCAAAGAATTCAGGTCCACCTCAATCTGCTGCTGAGGCCACTCGCCGGATGTTGTTAAAAAAGAGGCTCAGCTCCAAAGTGAATTCTGATGTCTtggataaattatttgatgaacCTGCGGCCACCGAGAAACCAAAGAAGGTAAAGTTTCAGCTAGACTCTGATGACCATTGTGAAGAGCCAAAACCACAGGACAGAAACAAGGATGATAACCTGGGGTCTGTGGATGAATATGGGGAGGGAGATGATATGGACGAGATGTATGGAGATACTGTGTATAATGAAAATGCGTATGAGACGTATGACTATGGGGACGATGGTTATGGTTATGATGATTTCTG 1859 0.4094 MVYCIHCMQNVIGMRPDDAALSCNLCGRVLEDFNFSSEPTFVKSASGQSQLSGRYIRTIQSEYSASRQRTLDRASDEMRYICLSLGVEDASLINQALAFYKIAIERNFTRGRKSEQVQAACLYIAFRENDKPYLLIDFSNYLRTNVYILGAVFLQLCKVLRLEEHPIVQKPVDPSLFIYKFTNNLLKHRNIPVSETALSIVASMKRDWMQTGRKPSGLCGAALYISALAHGIKCSKSDILRIVHVCEATLTKRLVEFENTESASLTIEELNMMAKEREKDQIEKPNGASGECASKDLLCEHRDSGVAYFALGLCEQCYKDFVNLSGGLDGGMDPPAFQRAEKERMSKPLSEENADEFNDLENASNSASAKGKEELHASEPESSGADVEHMAAKDGGFDESHRDDDTSEKTHDESDSLSDIDDLEVDGYLHNEEEKKFKKIIWEEMNREYLEEQAAKEAAAAAAKEAFEANFQNCSEDVLAARELAASAIAAVAKSRKEKKLRRAEEAKNSGPPQSAAEATRRMLLKKRLSSKVNSDVLDKLFDEPAATEKPKKVKFQLDSDDHCEEPKPQDRNKDDNLGSVDEYGEGDDMDEMYGDTVYNENAYETYDYGDDGYGYDDF 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02015 619 MobiDBLite consensus disorder prediction 549 581 - -
Bva04g02015 619 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 546 IPR000812 GO:0006352|GO:0070897
Bva04g02015 619 MobiDBLite consensus disorder prediction 372 416 - -
Bva04g02015 619 Pfam Brf1-like TBP-binding domain 418 543 IPR011665 -
Bva04g02015 619 CDD CYCLIN 193 248 IPR013763 -
Bva04g02015 619 Gene3D - 63 165 - -
Bva04g02015 619 PANTHER TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT 1 546 IPR029529 GO:0000126|GO:0000995|GO:0006383
Bva04g02015 619 SUPERFAMILY Cyclin-like 172 269 IPR036915 -
Bva04g02015 619 Pfam Transcription factor TFIIB repeat 68 157 IPR013150 GO:0017025
Bva04g02015 619 Pfam Transcription factor TFIIB repeat 169 259 IPR013150 GO:0017025
Bva04g02015 619 SMART cyclin_7 176 259 IPR013763 -
Bva04g02015 619 SMART cyclin_7 76 158 IPR013763 -
Bva04g02015 619 MobiDBLite consensus disorder prediction 549 619 - -
Bva04g02015 619 Gene3D Single helix bin 409 460 - -
Bva04g02015 619 Gene3D - 173 265 - -
Bva04g02015 619 MobiDBLite consensus disorder prediction 495 523 - -
Bva04g02015 619 PRINTS Transcription initiation factor IIB signature 16 36 IPR000812 GO:0006352|GO:0070897
Bva04g02015 619 PRINTS Transcription initiation factor IIB signature 119 138 IPR000812 GO:0006352|GO:0070897
Bva04g02015 619 PRINTS Transcription initiation factor IIB signature 213 229 IPR000812 GO:0006352|GO:0070897
Bva04g02015 619 SUPERFAMILY Cyclin-like 74 163 IPR036915 -
Bva04g02015 619 MobiDBLite consensus disorder prediction 341 429 - -
Bva04g02015 619 CDD CYCLIN 74 143 IPR013763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02015 1 527 Inorganic Solute Cotransporters AT2G01280 41.948 1.71e-119 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02015 K15196 - gmx:100789154 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02015 04 19993247 20005526 Bva04g02015 04 19993247 20005526 ECH