Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01999 ATGGCAAAAGAACTCCACCCTTCAATGCTTCTGGTTTTGGttacaatttttctctctatcaGTGATTCAGAGCAACTGCAGTCCTCTCAGTCTCAGGCTCTTCTACGAATTCAAGAGCTTTTGAACTTTCCTGCTATTTTAAGCAGTTGGAATAACAACACAGACTTCTGCAACACTGAACCCAATTCATCTCTGACAGTTGAATGCTACGAAGATACCATAACCCAGCTGCATATAATAGGCAATAAGAAAGCTCCTCTACGTCCACGGAATTTCTCAATAAAATCCTTTGCCACAGCACTGGTTAAACTTCCCAATTTGAAAGTCCTCACGCTTGTATCACTTGGCATATGGGGTCCATTGCCTGGCACGATTTCTCGTTTGTCATCACTGGAAATACTTAACATGAGTTCCAATTTTCTGTATGGTGGAATCCCTCAGGAATTCTCACTACTATCAAATCTCCAAACATTCATTCTTGATGACAACATGTTTGCTGGTCGGCTTCCGGATTGGCTAGATTCACTTGCAGCCTTAACTGTTCTAAGtctgaaaaataatttgttcaaTGGATCTCTGCCAAATTCATTGGGAAGCTTGGAAACTCTCAGAGTTCTTTCACTTTCTCATAATCACTTCTATGGAGTGGTACCTGATCTTAGTCGCTTGACAAATCTGCAAGTGCTGGAATTGGATGACAATGCTTTTGGACCTCAATTTCCTCGTCTTGGTAACAAGTTGGTCACTCTTACATTAAGCAACAATAAGTTCAGGTCTGGTATCCCTGCTGAGCTGAACTCGTATTATCAACTGCAAAGACTGGATATTTCATCCAATTCATTTGTGGGACCATTCCAACCAGCATTGTTGTCTCTTCCTTCTATTACTTACCTAAACATTTCTGGAAATGAACTTCGAGGGATGCTTTTTGAGAACTTCTCATGTAATTCTGAACTTGAACAAGTTGATTTATCTTCAAATCTTTTGACTGGCAGCTTGCCTAAATGTCTACTGTCAGATTCCAAAGGTAAAACTGTGAAGTATGCTGAAAATTGTCTAGAGGATACGAATCAGAATCAGCATCCATTGCCTTCTTGCCACACTGAAGCCTTAGCTGTGGGGATATTACCCGAGAGAAGGAAGCATAAACAAGTTTCTAAGGTGCTTATTTCCCTTGGGATAATTGGTGGGTCTCTTGGAGGAGTATCACTTGTTGcactgattttctttcttgttagaAGACGAAatgtcaaaaacaaaactaagaACCCTCCAACCAGATCAATATCAGAGAATGCAGCTTCTGGATACACCTCTAAGTTGCTTTCTGATGCCAGGTATATATCTCAAACAATGAAAATGGGATCTGTTGGCTTGCCAACTTATCGAACTTTTTCACTGGAAGAGATAGAGTCGGCTACAAACAACTTTGAAACGGCTTCCTTTATGGGTGAAGGCTCCCATGGGCAGATATACAGAGGACGGCTGAAGAATGGTTCACTTGTTGCGATCAAATGcataaaaatgatgaagagCTACAGCACTCAAAACATGATGCAGCGTATGGAGCTGATATCAAAACTTAGGCATCCTCATTTAGTGAGTGCTCTTGGACACTGCTTCGAatgtaacttggatgattcaagTGTCAGCAGAATATTTCTTGTCTTCGAATACATACCAAATGGCACGCTCAAGAGCTGGATCTCTGATGGGCATTATAGACAATCACTAAATTGGACCCAGCGCATAGCTGCTGCAATTGGAGTAGCAAAGGGCATCCAGTTTTTGCATACAGGAATAGTCCCTGGTGTATATTCAAACAATCTCCAAGTAACAGATGTATTATTGGATCAGAACCTTGTTGCAAAAATCAGCAATTATAACCTGCCTCTATCATCTAACATGAGAAAGGTTAagcataaaatttcttctagTGGATCCAAAAGTACTAGCAGTAATAAAAGTGTAAAACTTGAAGATAAGTCTGACATGTACGACTTTGGAGTGATACTTTTGGAAATCATCCTGGGAAGGACAATAAAGTCAAGGAATGATGTGGATGCTTTAAGGGATCTGTTGCAAGCAAGTATAGTAGCTGGTGATGAAGCTCGGAGAAGCATTGCAGATGCAGCAGTTAGCAAAGCATGCTTGGATCAATCACTGAAGACAATGATGGAGATATGCGTGAGGTGCCTTGTTAGAGAACCAGCCGATAGGCCCTCCATTGAGGATATTCTATGGAATTTGCAGTTTGCTGCTCAAGTCCATGATGCATGGCGAGGGGACTCTCAGAGTAGCGAGAGCTCGCCAGGCTCGCCTTTAGAACCGCGACGATTCACCTTCCATTATCAATACAGAGGTTG 2366 0.3969 MAKELHPSMLLVLVTIFLSISDSEQLQSSQSQALLRIQELLNFPAILSSWNNNTDFCNTEPNSSLTVECYEDTITQLHIIGNKKAPLRPRNFSIKSFATALVKLPNLKVLTLVSLGIWGPLPGTISRLSSLEILNMSSNFLYGGIPQEFSLLSNLQTFILDDNMFAGRLPDWLDSLAALTVLSLKNNLFNGSLPNSLGSLETLRVLSLSHNHFYGVVPDLSRLTNLQVLELDDNAFGPQFPRLGNKLVTLTLSNNKFRSGIPAELNSYYQLQRLDISSNSFVGPFQPALLSLPSITYLNISGNELRGMLFENFSCNSELEQVDLSSNLLTGSLPKCLLSDSKGKTVKYAENCLEDTNQNQHPLPSCHTEALAVGILPERRKHKQVSKVLISLGIIGGSLGGVSLVALIFFLVRRRNVKNKTKNPPTRSISENAASGYTSKLLSDARYISQTMKMGSVGLPTYRTFSLEEIESATNNFETASFMGEGSHGQIYRGRLKNGSLVAIKCIKMMKSYSTQNMMQRMELISKLRHPHLVSALGHCFECNLDDSSVSRIFLVFEYIPNGTLKSWISDGHYRQSLNWTQRIAAAIGVAKGIQFLHTGIVPGVYSNNLQVTDVLLDQNLVAKISNYNLPLSSNMRKVKHKISSSGSKSTSSNKSVKLEDKSDMYDFGVILLEIILGRTIKSRNDVDALRDLLQASIVAGDEARRSIADAAVSKACLDQSLKTMMEICVRCLVREPADRPSIEDILWNLQFAAQVHDAWRGDSQSSESSPGSPLEPRRFTFHYQYRG 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01999 788 Gene3D Transferase(Phosphotransferase) domain 1 560 768 - -
Bva04g01999 788 ProSiteProfiles Protein kinase domain profile. 477 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01999 788 SUPERFAMILY L domain-like 30 353 - -
Bva04g01999 788 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 6 773 - -
Bva04g01999 788 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 6 773 - -
Bva04g01999 788 Gene3D Ribonuclease Inhibitor 242 361 IPR032675 -
Bva04g01999 788 Gene3D Ribonuclease Inhibitor 27 241 IPR032675 -
Bva04g01999 788 Gene3D Phosphorylase Kinase; domain 1 448 559 - -
Bva04g01999 788 Pfam Protein tyrosine and serine/threonine kinase 481 748 IPR001245 GO:0004672|GO:0006468
Bva04g01999 788 SUPERFAMILY Protein kinase-like (PK-like) 457 753 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01999 Bva-Chr4 19904802 19909859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01999 43 774 Miscellaneous Gene Families AT3G03770 64.082 0.0 907
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Bva04g01999 PK_Tyr_Ser-Thr 8.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01999 - - gmx:100807539 1154.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01999 04 19904802 19909859 Bva04g01999 04 19904802 19909859 ECH