Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01980 ATGGTTAGCGTACACAGTTCTTACACCGTCGTCCCCTCCGAGGCAACGCCTAATGGAAAACTCTACTCCCTATGCGAGCAAATCAAGCTACGAGCCCATGCACCTCAGCTCTTTGTTTACGAACCCATTTCCAATCACAATGTTTCTATTCAAACTCTCATAACCTCTCTCGGCAAGGCATTGGTTACCTACTATCCCTTTGCCGGCCGGTTATGCTGGATCGGCGGTGCCCGATGGGTTCTAGATTGCAATGCCAAGGGAGCTCAGATTTTGGAAGCCAGTTGCCAAGCAAAGTTGGAAGATTTCGGTGATTTTGTTCCTACCGGTGTGGTGGAACAGCTTATACCCACCGTCGATTATGGTCCTCCGATCCAGGAGGTGCCGCTGCTCGTGGTGCAGCTAACCAGATTCAGATGTGGTGGTCTCACTATTGGGATTGCCTTCTGCCGCGGTGTGTGTGATGGAACGGGTAGCATGAGATTCATCAGCTCGTGGGCCAAGTTAGCCAGAGGAGAAGCTCTGGATTTGAGTGAGATGCCAATCCATGATCGAACGCCGTTGAATTCACGCAAGCTGAATAGGGCACCGCGTTTTGACCATTCTGAGTTCTCTCCGCCTCCCCCCTGGCTAGGTAGCTCCGGCTCAGTGGACACGAAGACGGGTGTTGCCGTTTTGAAGCTCACCAAAGTGCAAGTTAACAAGCTCAAGCAAAAAGCCAGCTGCGACTTTTCTGTCAACAAAAACAAGGCTCGACCTTATACTAGTTTTGAGGTTGTTGCAGGGCACTTGTGGAGATGCGTCAGCAAGGCACGGCACGCCGGAAACGGTGGCCAACCAACGAGGTTGTCAACGTTAGCCAATTGTCGGAACCGATTGAAGCCACCCCTTCCCGATGGTTATGCGGGAAATGTAGCATTTCCTACGGTGACACACACATGCACCTTCGATGAAATTACATACAGGCCTCTGGGTTTTGCCGTTTGGAACATAAGAGAAGCACTTGATAGGCTCACAGACGAGTACGTAAGCTCAACTCTTGATTACATAGAAACCCAGAAGGATATGAACACGGTGAGGTACAATTTCCATTACCCTGCTCCTTTTGTTCgaaaaggagaagaatttAAAGGAAACCCGAATCTGTTTGTTGTTAGCTGGATGAATTTTTCGTTTCAAGGAGCAGATTTTGGGTGGGGAAAGCCCGTTTATTTTGGTCCAGGCTTCATGGATTCTGAAGGGAAGGCTTTCGTTATGAACAATTCCAATGGCGATGGCCTTATTCTGGCGATTTGTTTGCAAGCATCTCATATGGATGAATTTAAGAAATTGTTTTACCAGGATATTGACCACGTTGCTTTTCCTACTTCTAGATTCTG 1376 0.4804 MVSVHSSYTVVPSEATPNGKLYSLCEQIKLRAHAPQLFVYEPISNHNVSIQTLITSLGKALVTYYPFAGRLCWIGGARWVLDCNAKGAQILEASCQAKLEDFGDFVPTGVVEQLIPTVDYGPPIQEVPLLVVQLTRFRCGGLTIGIAFCRGVCDGTGSMRFISSWAKLARGEALDLSEMPIHDRTPLNSRKLNRAPRFDHSEFSPPPPWLGSSGSVDTKTGVAVLKLTKVQVNKLKQKASCDFSVNKNKARPYTSFEVVAGHLWRCVSKARHAGNGGQPTRLSTLANCRNRLKPPLPDGYAGNVAFPTVTHTCTFDEITYRPLGFAVWNIREALDRLTDEYVSSTLDYIETQKDMNTVRYNFHYPAPFVRKGEEFKGNPNLFVVSWMNFSFQGADFGWGKPVYFGPGFMDSEGKAFVMNNSNGDGLILAICLQASHMDEFKKLFYQDIDHVAFPTSRF 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01980 458 Pfam Transferase family 1 445 - -
Bva04g01980 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 455 - -
Bva04g01980 458 Gene3D - 213 447 IPR023213 -
Bva04g01980 458 PANTHER SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-RELATED 4 455 - -
Bva04g01980 458 Gene3D - 1 205 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01980 Bva-Chr4 19814950 19816504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01980 2 446 Monolignol Biosynthesis Gene Families AT5G48930 37.472 9.53e-91 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01980 K13065 - gmx:100775549 576.63