Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01966 ATGTGGATAATGAAAACAAAGGATCCGACTACGATCGGTCACGTTTTTTCTGAATCGGTTTCTTTGCTTGTTGCTTCCgatccttctttttttctagcTCACGAGATCGATCTTGGATTTCTTCGGATTTTTGGGGTGACTCAAGTGGGCTATCATTTGAATGGGGAGACGATGCCAGAGTTGAGAAGTGGAGCCAGAAGGTCGAAACGGCTTAGTGATCTTCAGCCTGCCCCACTACCTATTGATCAAGGAGAGAATTGGGTACAACCTGCTCAAACCAGAACCAGGAGGAGAGTTGGAGGTGGAAGAGGCAGAGGTGGTAATGCCACAGCTTTAGCCAAAGGGCCTTCGCCAGCCGTACCCACAAGGCGAACTGCAGCTGGTAGAGGTCGGGGACTCAGGTTGATTAATCTTGATCCTGAACCTTGTGAGGCTCTTCCTGAACCCGTTGCATTAGGGGCCCCAGAACCCCTTTACAACCGTGTAGAGGTAGTGgccaataataatattgtgaTGGAGGGGGGAAGCGCAGAGAAAGTGGTGGCAGCTGAAGAAGAAGCCAGCACAACACCTGTTCCCGAGAGGGTACAAGTTGGTAGTTCTCCTGTATAtaagatagaaagaaaattgggtAAGGGAGGATTTGGCCAAGTGTATGTTGGCAGAAGGGTTAGTGGTGGCTCTGACCGGAATGGCCCTGATGCAATTGAGGTTGCACTGAAGTTTGAGCACAGAAATAGTAAAGGCTGCAATTATGGGCCTCCTTATGAGTGGCAAGTCTACAATACACTAAATGGTTGTTATGGCATTCCCTGGGTTCATTACAAGGGCCGCCAAGGAGATTTCTACATTCTGGTCATGGACATGCTTGGGCCCAGTCTTTGGGATGTATGGAATTCTCTTGGTCAATCGATGCCACAAAGTATGGTTGCTTGCATTGCAGTGGAGGCAATATCGATTCTTGAGAAGCTCCACTTGAAAGGATTTGTGCATGGTGATGTAAAACCGgaaaattttttacttggCCAACCTGGAACAGCCGATGAGAAGAAGCTGTATCTTATTGATCTTGGTCTGGCATCTAGATGGAAGGACGCATCATCTGGTCAACATGTTGAATATGATCAGAGACCTGACATATTTAGGGGAACAATAAGGTATGCCAGTGTACATGCACATTTAGGTAGGACTGGAAGTCGAAGGGATGATCTTGAATCACTAGCATACACATTAATATTTCTGATAAAAGGGAGGCTACCATGGCAGGGTTATCAGGGTGACAATAAAAGTTTTCTTGTTTGTAAGAAAAAGATGTCCACTTCACCGGAGTTGATGTGCTGCTTTTGTCCTCCACCATTCAAGCAGTTCCTTGAAGCTGTTACCAACATGAGATTTGATGAAGAGCCAAATTATGCCAagcttatttcattttttgaaagttTAATTGAACCATGTACACCGTTAAGACCAATCAGAATTGATGGAGCCCTAAAGGTTGGACAAAAGCGGGGAAGACCACTTATAAATTTGGAAGAAGATGAGCaaccaaagaagaaagttCGCGTGGGGAGTCCTGCTACCCAATGGATATCAGTGTATAATGCACGTCGTCCCATGAAGCAGAGATATCACTATAATGTGGCAGACACAAGGCTCCGACAGCATGTGGACAAGGGTAATGAGGATGGATTGCACATCAGCTGTGTGGCGTCTGCAGCAAATCTATGGGCCCTTATCATGGATGCAGGAACAGGTTTTTCTTCCCAGGTTTATGAATTGTCAGCTGTCTTCCTTCATAAGGATTGGATCATGGAACAATGGGAGAAAAATTACTATATCAGTTCAATAGCTGGTGCTGCTAATGGGAGTTCCTTGGTTGTCATGTCCAAAGGAACCCCTTACACACAGCAATCCTACAAAGTGAGTGAATCGTTTCCTTTCAAGTGGATAAATAAGAAGTGGAAAGAAGGTTTCCATGTTACCTCCATGACTACTGCTGGCAATCGCTGGGGAGTTGTTATGTCCCGGAATGCTGGGTATTCTGATCAGGTTGTGGAGCTTGACTTTTTATATCCAAGTGAAGGAATCCATCGGCGATGGGAGAGTGGTTACCGGATAACATCTATGGCTGCTACTCCCGATCAGGCCGCCTTCATTCTGAGTATACCAAAACGCAAGCTGCTTGATGAAACTCAAGAGACCCTGCGTACCTCTGCCTTCCCTAGCACCCATGTAAAGGAGAAATGGTCCAAGAATCTATATATCGCTTCCATATGTTATGGGCGGACTGTGTGCTA 2297 0.441 MWIMKTKDPTTIGHVFSESVSLLVASDPSFFLAHEIDLGFLRIFGVTQVGYHLNGETMPELRSGARRSKRLSDLQPAPLPIDQGENWVQPAQTRTRRRVGGGRGRGGNATALAKGPSPAVPTRRTAAGRGRGLRLINLDPEPCEALPEPVALGAPEPLYNRVEVVANNNIVMEGGSAEKVVAAEEEASTTPVPERVQVGSSPVYKIERKLGKGGFGQVYVGRRVSGGSDRNGPDAIEVALKFEHRNSKGCNYGPPYEWQVYNTLNGCYGIPWVHYKGRQGDFYILVMDMLGPSLWDVWNSLGQSMPQSMVACIAVEAISILEKLHLKGFVHGDVKPENFLLGQPGTADEKKLYLIDLGLASRWKDASSGQHVEYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMSTSPELMCCFCPPPFKQFLEAVTNMRFDEEPNYAKLISFFESLIEPCTPLRPIRIDGALKVGQKRGRPLINLEEDEQPKKKVRVGSPATQWISVYNARRPMKQRYHYNVADTRLRQHVDKGNEDGLHISCVASAANLWALIMDAGTGFSSQVYELSAVFLHKDWIMEQWEKNYYISSIAGAANGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGNRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWESGYRITSMAATPDQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWSKNLYIASICYGRTVC 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01966 765 CDD STKc_CK1 204 478 - -
Bva04g01966 765 SUPERFAMILY Protein kinase-like (PK-like) 204 492 IPR011009 -
Bva04g01966 765 ProSiteProfiles Protein kinase domain profile. 204 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01966 765 PANTHER BNAA05G37270D PROTEIN 163 739 - -
Bva04g01966 765 Pfam Protein kinase domain 204 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01966 765 ProSitePatterns Protein kinases ATP-binding region signature. 210 241 IPR017441 GO:0005524
Bva04g01966 765 PANTHER CASEIN KINASE-RELATED 163 739 - -
Bva04g01966 765 MobiDBLite consensus disorder prediction 92 126 - -
Bva04g01966 765 ProSitePatterns Serine/Threonine protein kinases active-site signature. 329 341 IPR008271 GO:0004672|GO:0006468
Bva04g01966 765 SMART serkin_6 204 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01966 765 Gene3D Transferase(Phosphotransferase) domain 1 169 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01966 Bva-Chr4 19743552 19750627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01966 257 421 EF-hand Containing Proteins AT2G46700 26.506 5.63e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Bva04g01966 Pkinase 1.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01966 - - gmx:100801967 1323.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02567 06 16230505 16237086 Bva04g01966 04 19743552 19750627 BWGD
Bva04g01966 04 19743552 19750627 Bva04g01966 04 19743552 19750627 ECH