Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01951 ATGGCAAACCCAGAATCAAATTTGCCCCCGGGTTTCAGGTTTCACCCAACTGATGAGGAGCTCATTCTCCACTACCTGAGAAAGAGGGTTGCTTCGATCCCTTTGCCAGTTTCCATCATTGCAGAGGTTGATATCTACAAGTTTGATCCATGGGATTTACCAGCAAAGGCAGCGTTTGGGGAAAAAGAATGGTACTTTTTCAGTCCCAGAGACCGTAAGTACCCAAATGGTGTGAGGCCAAACAGGGCAGCTGCTTCAGGGTATTGGAAGGCAACTGGTACTGATAAGACCATTATGGCATCTTTACATGGAGGAAGACGCAGCCAAGAGAACATTGGTGTGAAGAAGGCTCTCGTGTTCTACAAAGGGAGACCCCCAAAGGGGATCAAGACCAATTGGATCATGCATGAGTATCGCCTTCTAGACAACCACAACAACAAACCCATTAAGCTCAAGGACTCGTCCATGAGGCTAGATGACTGGGTTCTGTGCCGGATATACAAGAAGTCTAAATATGCTTTGCCTGCAACAGAGACAACAGTTGTGGGTCTTCATGAGCATGATCAAGCAGAGGAATATCTATTGGCAGATACCCTTTTGCCTCCGAGCTCAAAAACGCTCCCTGCACCCCAGAACACACTGATCTCTCAGAAATCTGTGTCTTTCTCCAACTTGCTAGACGCCATGGATTATTCCATGTTGAGCAGCATCTTATCTGATCAGAACCAACCGAACAATCCAACTAGATGTGGATCTGGTGCACCCTTAAACTCTGTCATTCTGGACCAAGCTTCAGCTTCCCCTGATCACAATAGCTGCGACAGCAACATTAATAGCTACTTGGTTCAATTGAACAACCCTTCTTCAGCAGTGCCCAACATGGAAAATTGCAGACCCAAACGCCAGCTTTCAAATATAGACGAGGATACGATTCcatcaccaaaaaaatacCTCAGTTCTTGCAATTTCGCCAACAGTCAAGCCAACACCCAATACGAGAACCCACAATGGAACTTCCTCCTCAAGCAGTTACCGTTGAATCAACAGCTACTTCTGGGTCCTCATCTTCGATTTCAAGGATG 1082 0.4575 MANPESNLPPGFRFHPTDEELILHYLRKRVASIPLPVSIIAEVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGVRPNRAAASGYWKATGTDKTIMASLHGGRRSQENIGVKKALVFYKGRPPKGIKTNWIMHEYRLLDNHNNKPIKLKDSSMRLDDWVLCRIYKKSKYALPATETTVVGLHEHDQAEEYLLADTLLPPSSKTLPAPQNTLISQKSVSFSNLLDAMDYSMLSSILSDQNQPNNPTRCGSGAPLNSVILDQASASPDHNSCDSNINSYLVQLNNPSSAVPNMENCRPKRQLSNIDEDTIPSPKKYLSSCNFANSQANTQYENPQWNFLLKQLPLNQQLLLGPHLRFQG 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01951 360 PANTHER OS01G0104200 PROTEIN 6 309 - -
Bva04g01951 360 PANTHER NAC TRANSCRIPTION FACTOR 56 6 309 - -
Bva04g01951 360 SUPERFAMILY NAC domain 4 169 IPR036093 GO:0003677|GO:0006355
Bva04g01951 360 ProSiteProfiles NAC domain profile. 8 169 IPR003441 GO:0003677|GO:0006355
Bva04g01951 360 Pfam No apical meristem (NAM) protein 9 140 IPR003441 GO:0003677|GO:0006355
Bva04g01951 360 Gene3D NAC domain 17 173 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01951 Bva-Chr4 19668466 19670184 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01951 3 360 NAC Transcription Factor Family AT3G04070 48.626 4.64e-105 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva04g01951 NAM 2.3e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01951 - - gmx:100301906 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01951 04 19668466 19670184 Bva04g01951 04 19668466 19670184 ECH