Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01949 ATGCTCAAGCGTCCAAGTCGTCCGGAGCCCTTCTCCGACCAGATCTATAGGTTTCGTGGGGTTTTGATGCTGATCTCAGCCCCACTCCTTCTCGTCACTTTTGTACTCTACTTAATGCCTGGAAGCTCTTCGTCTCAGCCTATGGAGGACTACGCTCTGGCTAATCGTAAAATGTCTCCCGCTTTGAAATCCACTAACTCCTTCGCGGTCATCTTCGATGCTGGTAGTTCTGGCAGCCGCGTACATGTCTTCCATTTCGATCAGAACTTAGATCTCGTTCACATTGGCAAAGATCTTGAGCTTTTCGTGCAGATAAAACCGGGTTTGAGTGCATATGCTCAAAATCCACAGCAAGCTGCGGATTCTCTGATTCCTCTTTTGGATAAAGCGGAAAGTGTTGTTCCCCGAGAGTTGCATCCTAAGACACCCGTTAGAGTTGGAGCAACTGCAGGTTTGAGGGCTTTGGAAGGGGATGCTTCTGATAGGATCTTGCAAGCGGTTAGGGATATGCTGAAGGAAAGAAGCACCCTAAAAGCTGAGACTGATGCAGTTACAGTGTTGGATGGAACGCAAGAAGGCGCTTATCAATGGGTGACAATTAACTATCTATTGGGCAACGTGGGTAAAGAGTATTCAGACACAGTTGGAGTAGTTGATCTTGGAGGTGGATCTGTTCAAATGGCATATGCCGTCTCAGAGAAAGATGCTGCAAATGCTCCAAAAGTATCCGAAGGAGAAGATCCATATATAAAGGAGATGTTCCTCAAGGGACGGAAATATTACCTCTATGTTCACAGTTACTTGCACTATGGTTTACTAGCAGCTCGTGCAGAAATCTTGAAGGTTACTGGTGATTCTGACAACCCTTGTATTTTAGCTGGCTACGATGgGTCTTACAAATATGGAGGAGTAGATTATAGGGCCTACTCATCTGGCTCAAGCTTGAATGATTGCAAAAGTGTAGCTCAAAAGgctcttaaaattaatgagtCAACATGTACACATATGAAGTGCACCTTTGGTGACATATGGAATGGTGGAGGGGGTGATGGACAGAAACATCTGTTTGTTgcctcatttttctttgaccGGGCTGCTGAGGCTGGTTTTGTTGATCCAAAGTTGCCTGTTGCCGAAGTTCGTCCCGTGGATTTTGAGGATAAAGCTAAGCTAGCTTGTAAAACAAAACTTGAGGATGCCAAATCCACTTTTCCACGTGTTGATGATAGTAACCTGccatatatatgcatggatCTCGTATACCAGTATACGTTACTTGTTGATGGATTTGGACTGTCTCCGCAGCAAAATATTACATTGGTGAAGCAAGTTAAATACCATGACTCCCTTGTTGAAGCAGCATGGCCCCTAGGCAGCGCTATAGAAGCCATATCATCAGCATA 1403 0.4348 MLKRPSRPEPFSDQIYRFRGVLMLISAPLLLVTFVLYLMPGSSSSQPMEDYALANRKMSPALKSTNSFAVIFDAGSSGSRVHVFHFDQNLDLVHIGKDLELFVQIKPGLSAYAQNPQQAADSLIPLLDKAESVVPRELHPKTPVRVGATAGLRALEGDASDRILQAVRDMLKERSTLKAETDAVTVLDGTQEGAYQWVTINYLLGNVGKEYSDTVGVVDLGGGSVQMAYAVSEKDAANAPKVSEGEDPYIKEMFLKGRKYYLYVHSYLHYGLLAARAEILKVTGDSDNPCILAGYDGSYKYGGVDYRAYSSGSSLNDCKSVAQKALKINESTCTHMKCTFGDIWNGGGGDGQKHLFVASFFFDRAAEAGFVDPKLPVAEVRPVDFEDKAKLACKTKLEDAKSTFPRVDDSNLPYICMDLVYQYTLLVDGFGLSPQQNITLVKQVKYHDSLVEAAWPLGSAIEAISSA 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01949 467 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 187 202 IPR000407 GO:0016787
Bva04g01949 467 Gene3D Exopolyphosphatase. Domain 2 188 445 - -
Bva04g01949 467 Gene3D - 68 461 - -
Bva04g01949 467 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 1 466 IPR000407 GO:0016787
Bva04g01949 467 CDD NBD_sugar-kinase_HSP70_actin 70 229 - -
Bva04g01949 467 Pfam GDA1/CD39 (nucleoside phosphatase) family 63 465 IPR000407 GO:0016787
Bva04g01949 467 PANTHER APYRASE-LIKE PROTEIN 1 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01949 Bva-Chr4 19654009 19658533 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01949 7 466 Calmodulin-binding Proteins AT3G04080 68.398 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01949 K14641 - gmx:100786073 756.133