Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01943 ATGGGTACCCTTTACAGAGAATTGGCTCCCCTTGATCTGCCTGGAGACCTAAATGTGAGCATCCAAGAATCCTTCATGGTATTTCCATCCAAAGAAACTGAGAGAAAAACTATGTTCTTGTCAAACATAGACAAAGTTCTCGACTTTGATGTGGAAACGGTTCACTTCTTTCCATCCCACAAAGATTTCCCACCCCACGTTGTTGCTGACAAGTTGGAGAACGCCCTAGCTGATGCTTTGGTGCATTATGACTTCTTTGCCGGAAGATTGAAGGTGAACTCCGAAACGGGTCGATTGGAGGTGGATTGCAATGCAGCCGGAGCAGTTCATAAGAATAAGGATTTCCTTAAACCAGGTGATCACCCACTCTGCGTTGTGCAGCTCACATCCTTCAAGTGTGGTGGCTTTGCAATCGGCTTATCAACAAGCCACACCACCTTTGACGGCTTCAGCTTCAAAACCTTCTTGGACAACCTGGCTGCACTAGCTGCTAAAAAGCCCTTGGTTGTGTCGCCTTGCCATGACAGGAAACTCCTGGCCGCGCGATCCCCACCACGTGTCAGCTTCGCACACCATGAGTTACTGAAGGCGGATAGCCTGCCCCCAGGGTTTGACTCCGGCGTCTTCCAAGCCTCCTCCGAGCAACTGGACTTCAAGATTTTCCAATTAACCTCCGACGACCTCAAAGCCCTCAAGGAGAAGGCGAAGCCCGCGGAAGGCCACCACTCCGCCGCCCGCGTAACTGGCTTCAACATTGTCACCGCCCACGTGTGGCGGTGCAAGGCGTTATCAGGAGAAGACGATGATCCTAACAGACCATCAACTGTACTATATGCTGTAGACATACGGTCCCGTTG 857 0.5099 MGTLYRELAPLDLPGDLNVSIQESFMVFPSKETERKTMFLSNIDKVLDFDVETVHFFPSHKDFPPHVVADKLENALADALVHYDFFAGRLKVNSETGRLEVDCNAAGAVHKNKDFLKPGDHPLCVVQLTSFKCGGFAIGLSTSHTTFDGFSFKTFLDNLAALAAKKPLVVSPCHDRKLLAARSPPRVSFAHHELLKADSLPPGFDSGVFQASSEQLDFKIFQLTSDDLKALKEKAKPAEGHHSAARVTGFNIVTAHVWRCKALSGEDDDPNRPSTVLYAVDIRSR 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01943 285 Pfam Transferase family 117 285 - -
Bva04g01943 285 Pfam Transferase family 18 109 - -
Bva04g01943 285 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 15 109 - -
Bva04g01943 285 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 116 285 - -
Bva04g01943 285 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 109 - -
Bva04g01943 285 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 116 285 - -
Bva04g01943 285 Gene3D - 205 285 IPR023213 -
Bva04g01943 285 Gene3D - 15 111 IPR023213 -
Bva04g01943 285 Gene3D - 112 195 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01943 Bva-Chr4 19630054 19632296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01943 17 285 Monolignol Biosynthesis Gene Families AT5G48930 33.333 4.91e-34 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01943 K13065 - gmx:100499712 363.229