Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01923 ATGAACTCATTTACGTCCTCATCGTCGTCCAAGGCCAAAAAGAAGCAAACGGCGACGACGACACAAGAGCAACAACATGAAACGGCATGGGGAGGGAGGTACCTGGGTGTTCGGAGAAGGCCGTGGGGGAGATACGCGGCGGAGATTCGAGACCCTTCCACCAAGGAACGGCATTGGCTTGGCACCTTCGACACTGCTGAAGAAGCTGCCTTAGCTTACGACAGAGCAGCTCGCTCCATGCGCGGTTCACGAGCCCGAACCAACTTCATCTACTCGGACACCCCACCGGGTTCTTCAGTTACCTCCATTATCTCTCCTGATGAGCAAGCTCGCCACAACCACGACTACTCCTCACTATTCGCTCCGAATTCGATTACCCACCAGCCCGACCCGACGTCCCAGCTCGCAGACTGCAATCTCTTGGGTGGGTTCCTGGGAATTAAGGACACTAACACCTGGTCTTCGCCGGCGACTTTTAACCAACATCACGCACCCACCATGGAGTTGGATCTTCATAATGTCAACACATCTCATTTCCACCAACTTTATAATGATAACAGTGCTGAGCTTCCTCCACTGCCACCGGATATTACCAGCTCCGCTAGTTACGATATGGGTCACGGGTTTTACAGCAATGAATTTGGGTATTCGGAGCAGAGCAGCGGGTCCGGGACTACTTCAAGAGGATTCGAATCATCAAGCGGGTCGTCCTACTCGTATTTGGGTTTTGATTCAGAAGATTACGTGCATAGTCCACTGTTCAGCGCAATGCCAGCAGTGTCAGATAATCTCCCGGATGGCTTCGATTTGGGCAGCTCCTCTTATTTCTTCTG 833 0.5222 MNSFTSSSSSKAKKKQTATTTQEQQHETAWGGRYLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGSRARTNFIYSDTPPGSSVTSIISPDEQARHNHDYSSLFAPNSITHQPDPTSQLADCNLLGGFLGIKDTNTWSSPATFNQHHAPTMELDLHNVNTSHFHQLYNDNSAELPPLPPDITSSASYDMGHGFYSNEFGYSEQSSGSGTTSRGFESSSGSSYSYLGFDSEDYVHSPLFSAMPAVSDNLPDGFDLGSSSYFF 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01923 277 PRINTS Ethylene responsive element binding protein signature 34 45 IPR001471 GO:0003700|GO:0006355
Bva04g01923 277 PRINTS Ethylene responsive element binding protein signature 56 72 IPR001471 GO:0003700|GO:0006355
Bva04g01923 277 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP 5 277 - -
Bva04g01923 277 CDD AP2 33 89 IPR001471 GO:0003700|GO:0006355
Bva04g01923 277 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 5 277 - -
Bva04g01923 277 MobiDBLite consensus disorder prediction 1 32 - -
Bva04g01923 277 Pfam AP2 domain 34 82 IPR001471 GO:0003700|GO:0006355
Bva04g01923 277 SMART rav1_2 33 96 IPR001471 GO:0003700|GO:0006355
Bva04g01923 277 MobiDBLite consensus disorder prediction 1 28 - -
Bva04g01923 277 Gene3D AP2/ERF domain 32 91 IPR036955 GO:0003700|GO:0006355
Bva04g01923 277 SUPERFAMILY DNA-binding domain 33 91 IPR016177 GO:0003677
Bva04g01923 277 ProSiteProfiles AP2/ERF domain profile. 33 90 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01923 Bva-Chr4 19520672 19521505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01923 7 269 AP2-EREBP Transcription Factor Family AT5G13910 42.754 2.93e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva04g01923 AP2 1.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01923 K09286 - gmx:100809600 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01923 04 19520672 19521505 Bva03g00207 03 1270763 1271593 BWGD
Bva04g01923 04 19520672 19521505 Bva04g01923 04 19520672 19521505 ECH