Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01916 ATGTCAGGGACTCTTGCAGCAGTATTAGGAGGAGCTGCAGGAGCCGTGGCATTGGTAGGGATAGTCATACTACTTATATGGTTCTGCTTGTCTCACCAGAGGAGTGTTTCAAGGACTTCGGAGACAGGGTCCTCTGATCCTTCCCAAGGAAGACATGGAATTGAATTAACATTACGAGATACCAGGCGTTTTGGGATTGAAGAACTATCTCTAGccacaaaaaatttcaatgacAAAAATTTGATTGGAGAAGGGAAATTTGGGGAGGTTTACAAGGGTTTACTTCATGATGGGATGCTTGTAGCCATCAAAAAGCGACGTGGATTCCCGAGTCAAGAATTTGTTGATGAGGTACGCTACCTCTCATCCATTAATCATCGGAACCTTGTAACTCTATTGGGCTACTGCCAGGAAAGCAATTTACAGTTTCTTATATACGAATATGTACCTAATGGGAGCGTCTCCAATCACTTGTATGGTGCCAGTCAACAATCGCGTGAAAAGCTAGaattcaagcatagactgTCAATAGCCACAGGTGCAGCTAAAGGCTTGGCTCATCTTCACTCTTTGAGCCCCCGTTTGGtgcataaaaatttcaaaacagcCAATGTTCTTGTGGTTGAAAACTTCATTGCTAAGGTTGCAGATGCAGGACTTCGCAATTTCTTGGGAAGAATTGATATTGCAGGCCCTTCATCTCAAGTGATAGCAGATGAGATATTCCTTGCTCCTGAGGTGAAAGAGTTTGGTCGATTTTCAGAAAAGAGTGATGTGTATAGTTTTGGAGTATTTCTACTGGAGCTGTTAAGTGGGAAGGAAGCAACAGAATTACCTTCTTCTGACTCTAATAAAAATCTGGTTGAATGGGTGCAAATTGATCAAGACCATCGGAATATCTCTAGCATCATTGATCAGAGATTGGGAAGTAGTTTCACAGCTGAAGGCATGGAAGAATTCATTCTGCTGATAATTCGATGTTTAGATTCTTCAAGTGAGAGACGACCTTCCATGAGCTATGTGGTAATGGAACTTGATCGAATATATGACAAAGAAATGAACTTGACAACCATGATGGGGCAAGGAACCCCAGATGTGACCCTTGGAAGTCAGTTATTCAAAGCAACAAGTCACATCGCATTCATCAAAAAGTA 1154 0.4029 MSGTLAAVLGGAAGAVALVGIVILLIWFCLSHQRSVSRTSETGSSDPSQGRHGIELTLRDTRRFGIEELSLATKNFNDKNLIGEGKFGEVYKGLLHDGMLVAIKKRRGFPSQEFVDEVRYLSSINHRNLVTLLGYCQESNLQFLIYEYVPNGSVSNHLYGASQQSREKLEFKHRLSIATGAAKGLAHLHSLSPRLVHKNFKTANVLVVENFIAKVADAGLRNFLGRIDIAGPSSQVIADEIFLAPEVKEFGRFSEKSDVYSFGVFLLELLSGKEATELPSSDSNKNLVEWVQIDQDHRNISSIIDQRLGSSFTAEGMEEFILLIIRCLDSSSERRPSMSYVVMELDRIYDKEMNLTTMMGQGTPDVTLGSQLFKATSHIAFIKK 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01916 384 ProSiteProfiles Protein kinase domain profile. 76 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01916 384 ProSitePatterns Protein kinases ATP-binding region signature. 82 105 IPR017441 GO:0005524
Bva04g01916 384 Gene3D Transferase(Phosphotransferase) domain 1 149 363 - -
Bva04g01916 384 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 376 - -
Bva04g01916 384 Pfam Protein tyrosine and serine/threonine kinase 80 345 IPR001245 GO:0004672|GO:0006468
Bva04g01916 384 Gene3D Phosphorylase Kinase; domain 1 38 148 - -
Bva04g01916 384 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 376 - -
Bva04g01916 384 SUPERFAMILY Protein kinase-like (PK-like) 55 345 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01916 Bva-Chr4 19473295 19477661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01916 64 383 Trihelix Transcription Factor Family AT5G38560 36.778 6.14e-61 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Bva04g01916 PK_Tyr_Ser-Thr 2.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01916 - - gmx:100305436 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01916 04 19473295 19477661 Bva04g01916 04 19473295 19477661 ECH