Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01915 ATGACTCCTTTTCTGTGGCCGCTTGTTTTGCCcttgctttttttcttctcgGAAGCTCTGGCTAGTTCAATTCCGAGCGATGCATTGTTGCTTCTCAGCTTCAAGGACTCCGTCTCTTCCGACCCTTCTAACCTGCTCTCTGGTTGGACCAACCAATCTTCTAGCAATCACTGCCAGTGGTACGGTGTCACCTGTGACGACCGCATCTCCGGTAAATGCAGAGTCATTGCCTTGAACTTAACCGGTCTTGTTGGCGGCAAACTAGCACCTTCAATTGGAGATATCTCTGAGCTTCGGGTTTTATCCATTCCCCATAACTTGTTCTCCGGTGAGATTCCAGAGAGCATAGGGAAGCTTCGGTTTTTGCAGGTTCTTGAGCTCCAAGGAAACAACTTCTCCGGGAGGATCCCTGACCAGATAAGCTATCCTCAATCTCTTCGCCTTCTTAACCTTTCTAATAATGCTTTTACTGGTCCATTACCCAGTAACTTGATTGGCTCTGGAAGTGTAAGAGTTGTTGATTTGTCGAATAATCAGCTTTCTGGTTCAATTCTAATAAATTCTTCGACTGGGTGTGACTCTTTGAACCATTTGAAACTTTCCAACAACTTTCTCTCCGGAAAAATCCCATCGGAAATTGGGAAATGCTGGAACTTGAGAACTCTTTTACTCAATGGCAATATCTTAGAAGGTCGAATCCCTCCCGAGATTGGGAATATCGTGGAGCTTAGAGTTCTAGATGTTTCTAAGAATAGCCTCACCGAAAGCCTGCCAAAAGAGCTAGCTAATAGCCGGAAATTGTCTATACTGGTGTTGACTGATTTATTCGAAAGTACCTCTCCTTCTGATGGAAGTTTGATGGATAGCTTTCGGGGAGAATTCAATGCCTTTGTGGGAAATATTCCTCCTCAAGTGTTTTTGCTTTCAAGTTTGCAGATTTTGTGGGCACCAAGGGCTAATCTTGGTGGAAGATTGCCCAGCGTCAGGACAGGCTCATGCTCGCTGAGAGTACTCAACTTGGCACAGAACTACTATACTGGCATGATACCAGGAAGTTTGGGGTTGTGTAGAAATCTAACTTACTTGGACTTGAGTTCCAATAATTTAGTGGGGTATCTCTCTTCCAGGGAGCTTCACATTCCTTGTATGATGTACTTCAATGTCAGCCGGAATAATATATCCGGCACACTTCCAGAATTTGGTAAAGAAAGCTGTGCTATGAGCCGCATCCCAGCTGCAGAAGGCCTTAAATTCCTAGGCAAAGAAGATTTTAGTAATGCATACTACAGAATCCCTGCTTTGGAACCTCAGATAAATGCTCTTGTTGGGCCAGGTTCAGAAGAGACTATTGTCATTAGCCATGATTTTAGTTGGAACGGTTTCATGGGATCTTTACCCTCGTTCTCATTAGGAGATAATCTTTTTGCTACTAAGAGTAAGATCTCCTTCCAGCTATTACTAAATAATAACAAGTTCAATGGAACAATACCATCTGGTCTGGTTTTGGACTGTAATGATCTCAAGATGTTGTCAGTTAACTTGAGTGTGAACCAACTATCTGGTGGGAATTCACAGGCACTGCTTCCGGACTGTCTGAAATTAACAGAGTTTGAAGCAGCGTACAACCAGATTAGCGGGTCAATTAGACCTCACATAGGTGACTGGATGATGCTTCAACGTCTTGATTTGAGTGGGAATAGATTATCAGGGTCACTGCCTGGTCAGTTGGGAAACCTTAAGAACATGAAATGGATGCTTCTAGGAGGAAGCAATCTAACAGGGGAAATCCCATCCCAACTTGGTCAGTTGACTTCCCTGACTGTTTTGAATCTATCCCACAATGCTCTAACGGGACCCATTCCCACAAGTTTGACAAATGCTGCAAATCTTGAAATTCTCTTGCTAGATCACAACAATCTTTCTGGGGAAATACCTTCATCCTTTTTAACTCTTTCTGCTCTAAAGAAATTGGATCTTTCTTTCAACAACTTTTCTGGTCATATACCCCGTCTTCAGCACCCAAGTGATTGTGATTCCTACAGAGGGAATGAACACCTGCTGTCTTGCCCTGATCCGTACTCAGATTCATCTGCTTATCTCCCCGTCCCTTTTGAAGTACAAAATAagcataaaaaaggaaaactgaAGACGCTGATAATTGCAGTGGTGACTTCTGCTTCTATATCACTCTGCATATTTCTGGGAATAGTATTGGTGATCACATGGGGAAGGAGCAAGTTTGGTCGGCTTGGCAGTCTTAGAAGGAGACAAGTAGTGACATTTCAGGATGTTCCAATTGAATTGAGTTACGACAATGTCGCCATAGCTACTGGCAACTTCAGCATCCGGAATCTAATTGGCACAGGTGGGTTTGGATCAACTTACAAGGCAGAACTATGCCCGGGTTTTCTTGTTGCCATAAAGAGGTTGTCCCTGGGTAGATTTCAAGGCATTCAACAATTTGAAACAGAAATAAGGACATTAGGGAGAATTCGACACAAGAACCTTGTAACTCTTATTGGTTATTATGTAGGAGAGGCTGAAATGTTCTTGATCTACAACTACCTCTCTGGTGGGAACCTCGAAGCTTTCATACACGACAAGTTAGAAAAAGTTCAGTGGCCAATTATACACAAGATAGCGATAGACATAGCAGAGGCTCTTGCTTACCTTCATTATACTTGTGTTCCTCGCATAGTTCACCGGGATATCAAGCCAAGCAACATCTTACTAGATGAGGATCTAAATGCCTATTTGTCAGATTTTGGCTTGGCAAGACTTCTAGAGGTATCTGAGACCCATGCCACAACTGATGTGGCTGGGACATTTGGCTATGTTGCACCTGAGTATGCCACCACTTGCAGGGTTTCTGAAAAGGCAGATGTTTATAGCTTTGGTGTTGTGTTGTTAGAATTAATGTCAGGAAGAAAATCACTGGATCCATCATTTTCTGAATATGGGAATGGATTCAATATTGTAACATGGGCGAAGTTGCTGATGACAGAAGGCCGTTCTTCTGAGCTATTCTCGCCGGCTCTGTGGGAAGCAGGGCCGAGGGAGAAGTTGTTAAATCTTCTAATGCTTGCATTAACCTGCACAGTAGAGACTCTTTCTATTAGGCCATCAATGAAGCAGGTTCTTGAGAAATTGAAGCAATTGAAAAGTTG 3167 0.4266 MTPFLWPLVLPLLFFFSEALASSIPSDALLLLSFKDSVSSDPSNLLSGWTNQSSSNHCQWYGVTCDDRISGKCRVIALNLTGLVGGKLAPSIGDISELRVLSIPHNLFSGEIPESIGKLRFLQVLELQGNNFSGRIPDQISYPQSLRLLNLSNNAFTGPLPSNLIGSGSVRVVDLSNNQLSGSILINSSTGCDSLNHLKLSNNFLSGKIPSEIGKCWNLRTLLLNGNILEGRIPPEIGNIVELRVLDVSKNSLTESLPKELANSRKLSILVLTDLFESTSPSDGSLMDSFRGEFNAFVGNIPPQVFLLSSLQILWAPRANLGGRLPSVRTGSCSLRVLNLAQNYYTGMIPGSLGLCRNLTYLDLSSNNLVGYLSSRELHIPCMMYFNVSRNNISGTLPEFGKESCAMSRIPAAEGLKFLGKEDFSNAYYRIPALEPQINALVGPGSEETIVISHDFSWNGFMGSLPSFSLGDNLFATKSKISFQLLLNNNKFNGTIPSGLVLDCNDLKMLSVNLSVNQLSGGNSQALLPDCLKLTEFEAAYNQISGSIRPHIGDWMMLQRLDLSGNRLSGSLPGQLGNLKNMKWMLLGGSNLTGEIPSQLGQLTSLTVLNLSHNALTGPIPTSLTNAANLEILLLDHNNLSGEIPSSFLTLSALKKLDLSFNNFSGHIPRLQHPSDCDSYRGNEHLLSCPDPYSDSSAYLPVPFEVQNKHKKGKLKTLIIAVVTSASISLCIFLGIVLVITWGRSKFGRLGSLRRRQVVTFQDVPIELSYDNVAIATGNFSIRNLIGTGGFGSTYKAELCPGFLVAIKRLSLGRFQGIQQFETEIRTLGRIRHKNLVTLIGYYVGEAEMFLIYNYLSGGNLEAFIHDKLEKVQWPIIHKIAIDIAEALAYLHYTCVPRIVHRDIKPSNILLDEDLNAYLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSEKADVYSFGVVLLELMSGRKSLDPSFSEYGNGFNIVTWAKLLMTEGRSSELFSPALWEAGPREKLLNLLMLALTCTVETLSIRPSMKQVLEKLKQLKS 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01915 1055 Pfam Leucine Rich repeat 356 369 IPR001611 GO:0005515
Bva04g01915 1055 SUPERFAMILY Protein kinase-like (PK-like) 759 1050 IPR011009 -
Bva04g01915 1055 Gene3D Ribonuclease Inhibitor 189 290 IPR032675 -
Bva04g01915 1055 Gene3D Ribonuclease Inhibitor 291 412 IPR032675 -
Bva04g01915 1055 SUPERFAMILY L domain-like 297 680 - -
Bva04g01915 1055 SUPERFAMILY RNI-like 80 402 - -
Bva04g01915 1055 Pfam Leucine rich repeat 558 616 IPR001611 GO:0005515
Bva04g01915 1055 CDD STKc_IRAK 786 1053 - -
Bva04g01915 1055 ProSitePatterns Serine/Threonine protein kinases active-site signature. 899 911 IPR008271 GO:0004672|GO:0006468
Bva04g01915 1055 ProSitePatterns Protein kinases ATP-binding region signature. 786 808 IPR017441 GO:0005524
Bva04g01915 1055 Pfam Protein kinase domain 782 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01915 1055 Pfam Leucine rich repeat N-terminal domain 25 66 IPR013210 -
Bva04g01915 1055 Gene3D Phosphorylase Kinase; domain 1 744 855 - -
Bva04g01915 1055 Gene3D Ribonuclease Inhibitor 25 188 IPR032675 -
Bva04g01915 1055 SMART serkin_6 780 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01915 1055 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 4 1054 - -
Bva04g01915 1055 PRINTS Leucine-rich repeat signature 558 571 - -
Bva04g01915 1055 PRINTS Leucine-rich repeat signature 603 616 - -
Bva04g01915 1055 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 4 1054 - -
Bva04g01915 1055 Gene3D Transferase(Phosphotransferase) domain 1 856 1055 - -
Bva04g01915 1055 ProSiteProfiles Protein kinase domain profile. 780 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01915 1055 Gene3D Ribonuclease Inhibitor 445 694 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01915 Bva-Chr4 19466123 19470348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01915 13 1054 Receptor kinase-like Gene Family AT3G02130 43.536 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Bva04g01915 Pkinase 3.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01915 - - gmx:100795047 1462.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01915 04 19466123 19470348 Bva04g01915 04 19466123 19470348 ECH