Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01909 ATGGTTGTGCAACCGCCGAAGTGTGTGAGTCCTATTCAGAGTGCTATTGTTACTGGAGAGCTTAAAGCTGAAGTAGCTGATGATTCCCAGCATTTGATGGTTTCAACCGATTGCAAGGCCGAGAAAAGTCCCAGGATTGTTTCGAAGTatggaagaaaaggaataaagactGAACAAAAACAACCAAAGGAGCCCGAGGAATCGTCAATGCAGAGGAGAGCTAGTGCTCGAATCCAAGCCAAGCAAAAAGCAGATAAGGAACTTCTGGTTCGTCGTAGAGTTGAGCTGCTAGATGAACAAGATGATGGTGGAAATGAAACTAAGAGTCGCTCCAAAAGAAGTCGTGTCACAGAAAATGTAGTTAAGGAAGAGGTGGTGGAGGAGGAAAAGAGAGATATCACGGCACCCAAGTCGAAGTTGGATGAGTCGACCAAGCTTGAGAGCAAGGCAAAAGTTAAGGGTTCAGAAGAAAATGTTGATTCTAAAAATGGGGGAGGGAATTTGGTTGAGAAAAGTGACACTCTTAAGGTGAAACAGACACTGAGGTTGTTTAACAAGCATTATCTTCATTTAGTCCAGGAGGAGGAGCAGAGGTGTAGGAAAGTGGAAGCAGATCGAAAAGTCTCTAAAAAAGGTTCAAAATCTAAGAAAGGGGCACCCCCTGAAGATATAAAGAACCCATCTAAGCGACCTGATTTAAAGGCTTTATCCAAGATGATGGAAAATAATGAGATACTGTACCCTGAGAAAAGAATTGGCAATATTCCAGGTATTAAGGTTGGACATCAGTTTTATTCACGTGCTGAAATGGTTGCTGTTGGGTTTCACAGCCACTGGTTGAATGGTATTGACTATATGGGCCAATCCTACCGTAAAGGGTTGGAGCATAGTAAATATACATTCCCCCTTGCTGTCGCTATTGTTTTATCGGGCATGTATGAGGATGATCTTGATAATGCCGAGGATGTAGTGTATACTGGTCAAGGTGGGCATAATTTGACAGGTGATAAGCGTCAAATTCGAGATCAGGTGTTGGAGCGCGGTAATCTAGCACTCAAGAACTGTATTGAGCAACGTGTGCTTGTTAGAGTGGTTCGCGGTCATGAATCTGCGAGCAGTTACACTGGCAAAGTTTACACATATGATGGCTTGTATAAAGTTGTTAATTATTGGGCAGAAAAGGGAATTTCTGGATTTACAGTCTATAAGTTTCGCCTTAGGAGGCTTGAAGGGCAGCCAACATTAACTACTAATCAGGTTTATTTTACTAATGAACGCGTGCCTCAGTCTGCTGCAGAGATACGAGGGTTGGTGTGCGAGGACATCACTGCAGGTCAAGAGGATATACCCATTCCTGCTACTAATTTGTTTGATGATCCCCCTGTTGCACCCACAGGTTTCACATATTGCAAGACCATCCAGGTCTCAAAAAATGTGAAGCTTCCTGCGGAAGGCACTGGATGCAATTGCAAAGGCGTTTGTGTAGATCCTAGATCCTGTGCATGTGCTTTACGTAATGGCTCTGATTTTCCCTATGTATCTCGTGATGGTGGCAGGCTAATTGAAGCTAAAGATGTTGTGTTTGAATGTGGTCCCAACTGTGGCTGTGGTCCTGGTTGTGTCAACCGAACTTCTCAGAGAGGGCTGCGATATAGACTTGAGGTTTTTCGCACTGCCAAGAAAGGGTGGGGTGTTAGATCTTGGGATTTTATTCCTTCTGGAGCTCCAGTTTGTGAGTACACAGGAATCCTAACGAGGGCTGATGATCTGGATAGACTGGACTATGCAAATGATAACAACTATATTTTTGAGATAGATTGCTTGCAGACAATGAAGGGCGTCGGTGGAAGAGAGAGGCGATCACAAGACGCATCTCTTGCAGATATCGATCTTTTGGACAAATCTGATGATCAAAATTCTGAGAGCGCGCCCGAGTTTTGCATTGATGCAGGCTCTACTGGAAATGTTTCTAGATTTATAAACCACAGTTGTGAGCCTAATCTCTTTGTCCAGTGTGTTCTGAGCTCACACCATGACCTTAAACTTGCCCGAGTGATGCTTTTTGCTGCAGACAACATACCACCTTTGCAGGAACTGACATATGATTACGGCTATGCATTGGATAGTGTCTGTGGTCCCGACGGTAAGATAAAGCAAATGCATTGCTTTTGTGGAGCGGCTGGCTGCAAGAAGCGCTTATTCTA 2204 0.4365 MVVQPPKCVSPIQSAIVTGELKAEVADDSQHLMVSTDCKAEKSPRIVSKYGRKGIKTEQKQPKEPEESSMQRRASARIQAKQKADKELLVRRRVELLDEQDDGGNETKSRSKRSRVTENVVKEEVVEEEKRDITAPKSKLDESTKLESKAKVKGSEENVDSKNGGGNLVEKSDTLKVKQTLRLFNKHYLHLVQEEEQRCRKVEADRKVSKKGSKSKKGAPPEDIKNPSKRPDLKALSKMMENNEILYPEKRIGNIPGIKVGHQFYSRAEMVAVGFHSHWLNGIDYMGQSYRKGLEHSKYTFPLAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLTGDKRQIRDQVLERGNLALKNCIEQRVLVRVVRGHESASSYTGKVYTYDGLYKVVNYWAEKGISGFTVYKFRLRRLEGQPTLTTNQVYFTNERVPQSAAEIRGLVCEDITAGQEDIPIPATNLFDDPPVAPTGFTYCKTIQVSKNVKLPAEGTGCNCKGVCVDPRSCACALRNGSDFPYVSRDGGRLIEAKDVVFECGPNCGCGPGCVNRTSQRGLRYRLEVFRTAKKGWGVRSWDFIPSGAPVCEYTGILTRADDLDRLDYANDNNYIFEIDCLQTMKGVGGRERRSQDASLADIDLLDKSDDQNSESAPEFCIDAGSTGNVSRFINHSCEPNLFVQCVLSSHHDLKLARVMLFAADNIPPLQELTYDYGYALDSVCGPDGKIKQMHCFCGAAGCKKRLF 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01909 734 SUPERFAMILY SET domain 436 710 IPR046341 -
Bva04g01909 734 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 86 734 IPR025794 GO:0016571
Bva04g01909 734 ProSiteProfiles YDG domain profile. 253 408 IPR003105 -
Bva04g01909 734 Gene3D - 236 428 IPR036987 -
Bva04g01909 734 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 70 733 - -
Bva04g01909 734 MobiDBLite consensus disorder prediction 78 158 - -
Bva04g01909 734 Pfam SET domain 562 704 IPR001214 GO:0005515
Bva04g01909 734 SMART G9a_1 248 412 IPR003105 -
Bva04g01909 734 MobiDBLite consensus disorder prediction 42 71 - -
Bva04g01909 734 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 70 733 - -
Bva04g01909 734 MobiDBLite consensus disorder prediction 199 234 - -
Bva04g01909 734 Gene3D SET domain 432 734 IPR046341 -
Bva04g01909 734 ProSiteProfiles SET domain profile. 551 704 IPR001214 GO:0005515
Bva04g01909 734 ProSiteProfiles Post-SET domain profile. 718 734 IPR003616 -
Bva04g01909 734 SUPERFAMILY PUA domain-like 235 427 IPR015947 -
Bva04g01909 734 SMART set_7 551 710 IPR001214 GO:0005515
Bva04g01909 734 ProSiteProfiles Pre-SET domain profile. 486 548 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Bva04g01909 734 Pfam Pre-SET motif 443 543 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Bva04g01909 734 CDD SET_AtSUVH-like 466 705 - -
Bva04g01909 734 SMART preset_2 439 535 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Bva04g01909 734 MobiDBLite consensus disorder prediction 35 168 - -
Bva04g01909 734 Pfam SAD/SRA domain 252 412 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01909 Bva-Chr4 19425003 19432800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01909 239 734 EF-hand Containing Proteins AT5G13960 66.398 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bva04g01909 SAD_SRA 2e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01909 K11420 - gmx:100795584 991.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01909 04 19425003 19432800 Bva04g01909 04 19425003 19432800 ECH