Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01900 ATGGCTTTCTCAGATAGCTCGCGCCGCCAATCTCTGATCCCTAGCTATCTCTACTCCTCATCTTCTTCCCTGAAAACCCTACCTCTGGAGAAGATGCTCAACTCATCTAGCTCCTTCGCTTCCATTTCCTCTCCATCTTCGAATCTCGAAGCAGGATCCTCGAGGAAGAGCTTCATGATTTCTGCCCCCAGCGAGCCTGGCAAGGTCGAGATGTACTCTCCGGCCTTCTATGCTGCTTGTACTGCCGGTGGAATCCTCAGCTGTGGTCTCACTCACATGGCCGTCACACCACTTGATCTAGTCAAATGTAATATGCAGATTGATCCTGCAAAGTATAAGAGCATTTCATCTGGATTTGGAGTTTTGCTTAAGGAACAGGGATTCAGAGGCTTTTTCCGTGGCTGGGTGCCTACCTTGCTTGGTTACAGTGCTCAGGGTGCCTGCAAATTTGGTTTCTATGAGTTCTTTAAGAAGTATTATTCTGATATTGCTGGCCCAGAGTATGCTGCCAAGTACAAGACTTTGATCTACCTTGCTGGTTCTGCATCTGCTGAGGTTATTGCGGATGTTGCACTTTGCCCCTTTGAGGCTGTGAAAGTCCGAGTTCAAACCCAGCCTGGTTTTGCTAGAGGTCTAGCTGATGGGCTTCCCAAATTTGTCAAGTCAGAAGGAACTTTAGGgTTGTACAAGGGTATAGTTCCTCTGTGGGGACGCCAGATTCCATATACAATGATGAAGTTTGCTTCTTTTGAGACCATCGTTGAGTTGATCTACAAGCATGCCATCCCCACACCAAAGAATGAATGCAGCAAAACTCTGCAACTTGGTGTGAGTTTTGCTGGTGGATATGTAGCCGGTGTATTTTGTGCCATCGTGTCTCATCCTGCTGACAACCTTGTCTCCTTCCTGAACAATGCCAAAGGGGCATCAGTTGGTGACGCTGTGAAGAAGCTTGGTTTGTGGGGTCTTTTCACCCGTGGTCTCCCTCTCCGTATTGTGATGATTGGAACCCTCACTGGAGCTCAATGGGGATTATACGATGCATTCAAAGTCTTCGTGGGACTGCCAACCACCGGAGGTGTTACCCCCGCGCCTGCTCAGGGTACTGCTGCCACTGAGCTTGCAAAGGCGTA 1133 0.4872 MAFSDSSRRQSLIPSYLYSSSSSLKTLPLEKMLNSSSSFASISSPSSNLEAGSSRKSFMISAPSEPGKVEMYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGFRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKFVKSEGTLGLYKGIVPLWGRQIPYTMMKFASFETIVELIYKHAIPTPKNECSKTLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGASVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGLYDAFKVFVGLPTTGGVTPAPAQGTAATELAKA 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01900 377 Pfam Mitochondrial carrier protein 78 161 IPR018108 -
Bva04g01900 377 Pfam Mitochondrial carrier protein 176 260 IPR018108 -
Bva04g01900 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 273 352 IPR018108 -
Bva04g01900 377 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 1 369 - -
Bva04g01900 377 Gene3D Mitochondrial carrier domain 29 169 IPR023395 -
Bva04g01900 377 Gene3D Mitochondrial carrier domain 170 354 IPR023395 -
Bva04g01900 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 75 159 IPR018108 -
Bva04g01900 377 SUPERFAMILY Mitochondrial carrier 78 348 IPR023395 -
Bva04g01900 377 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 369 IPR044677 GO:0005315|GO:1990547
Bva04g01900 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 172 256 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01900 Bva-Chr4 19370110 19374216 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01900 6 377 Chloroplast and Mitochondria Gene Families AT5G14040 81.167 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01900 K15102 - gmx:548006 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01900 04 19370110 19374216 Bva03g00239 03 1464431 1468567 BWGD
Bva04g01900 04 19370110 19374216 Bva04g01900 04 19370110 19374216 ECH
Bva03g00239 03 1464431 1468567 Bva04g01900 04 19370110 19374216 ECH