Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01878 ATGGAGAAGAACCTTGCAGAAAATTCCTGCAGTTTTGCTCGTAAGGGTGAACAGGCCAATGCCGGTGGCGATACATCTCATTCTCCGGTACCTGATCGCAGAGAGGGTGATGCAGAGCCAACAGAtaaaacagagagagaggcCCATAAGGAGGATAACGAAGACAATAAGGCTGATGAGAAATCTAACGGCAAGGCTAACGAGAAATCTGATGAAGTTCCAGGGTCTCCTCTTCATAGACTTGACAAAATTTCAGAAGACATCGATCATTTGCTGGCGACTCTACAGCGGAATGTAGAAGCGAACGCTGAGGAAGGTTCCTCAGAGATCCCTGGTTTCGTCGACAAGTTCTTGGATCTCGTTGAAAAGAAGATTGCCAGGTACGACAGTGCCGAAGGGAAAGCCAAGTGGGGAGAAGATCCTAAGGAAGATTCCTCAATGCTGGAAGCTGTGGATCGGGTTTCTAAGTTGGTTGAATTGCTGAGACAGTTGAAACCTGCCTCCGAGGAAGagagcaaacaaaaaaagagttcACTGGCGAACCTAGCTGGTGAAATCCAACAGCGAGCGATGGCTTATTTGGAAGAGGAGTTCAGGACAACAATGGAAGAATTTAGAAAGCCAAGTGAATCGGATCCAGGTGGCAAAGATCCCAAAGGGAAGCATGAAAAACAGGACAGCGGCCAATTGCCGGAATCCGAAGCCACAGAATCGGAAACAGGTTACCCTGAGGATGCCATTTCCTGTTTGAATAAAATAGCCAAACATATGGTATTTGGAGGGTACCAATTCGAGTGTTGTCAGGTTTATATGATTGTGAGGAGGCAAGCATTTGAAGAGAACTTGCACAAGCTAGAATGGGAGAAAACCAGCATCGACGACattgagaaaatgaattgGGAATCTTTAGAAAGGGAGATCCCATCATGGAACAGGACCTTCAGGCATTGTGCCTCTGTCTACCTCCCCGGCGAGAGAAAGCTGTCTGAGTCGGTGTTCACCGGCCACCCAGCTATATCGGAGAGCCTCTTCAGCAGCCTCACTCACGGCGTTATCATACAGCTGCTGAATTTCGCGGAAGGCGTGGCTATGACGAAGCTCGGGGCGGAGAAGTTATTCAAATTCCTGGACATGTACGAGACCTTGCGGGATGTAAGTCCGGTCTTAAACAATCTTTTTTCGGAAGAGATTTCGAAGGAGATGAAAAGCGAAATGACGTCGGCCAAGTCCAGGCTGGGCGAGGCTGCAATATCAATATTCTGCGAGCTAGAAAATTCCATCAGATCAGATGCAGGAAAACCGGTTCCCGGAGGTGCGATTCATCCATTGACTCGCTGGGTGGTGAACTATCTCAAGTTATCGTGCGAGTACAAGGACGCGTTAGAGCTAGTGTTCAAGGAGCATTCCAAGATCGAACGCGCAGACTCAACCAGCAGGCCACGCCACCAGGGAGAGTCGTCTACTCATTCCAAAAACGACGGTGACAAGTCTGAGCAATCGCCGTTTTCGGCGCAGCTGACGAGGATGATGGATGTACTAGACGCAAATCTGGAAACGAAGGCGAGGCTTTACAGGGACGTGGCACTGAGCTCCATTTTCATGATGAACAACGGCAGGTACATACTGCAGAAAATCAAAGCGACGGAGATCCACCAGTCGATGGGCGACGCGTGGAGCAGAAAGAAATCATCAGACCTGAGAACTTTCCATAACAACTACAAGAGGGAGACGTGGGGTAAACTGTTGCAATGTTTAAACCCAGAAGGGTTAACTAACAATGGGAAGGTGATGAAGCCGGTGCTGAAGGAGAAGTTCAAGAACTTCAATGCCATGTTCGAAGAGATACACAAAACGCAGAGCCATTGGATGGTGGTGGACGAACAGCTCCAATCTGAACTAAGAGTTTCTATATCGGGAGTGGTGATTCCCGCCTACAGGTCATTCCTGGGGAGATACTCACAGTATTTGGATCCGGGAAGACAAACAGAGaagtatataaaattacagCCCGATGATATAGAGACATATATTGACGACCTATTTGATGGAAAGAACCCAACCTCCATGAGTAGAAAGAGAACATA 2084 0.4674 MEKNLAENSCSFARKGEQANAGGDTSHSPVPDRREGDAEPTDKTEREAHKEDNEDNKADEKSNGKANEKSDEVPGSPLHRLDKISEDIDHLLATLQRNVEANAEEGSSEIPGFVDKFLDLVEKKIARYDSAEGKAKWGEDPKEDSSMLEAVDRVSKLVELLRQLKPASEEESKQKKSSLANLAGEIQQRAMAYLEEEFRTTMEEFRKPSESDPGGKDPKGKHEKQDSGQLPESEATESETGYPEDAISCLNKIAKHMVFGGYQFECCQVYMIVRRQAFEENLHKLEWEKTSIDDIEKMNWESLEREIPSWNRTFRHCASVYLPGERKLSESVFTGHPAISESLFSSLTHGVIIQLLNFAEGVAMTKLGAEKLFKFLDMYETLRDVSPVLNNLFSEEISKEMKSEMTSAKSRLGEAAISIFCELENSIRSDAGKPVPGGAIHPLTRWVVNYLKLSCEYKDALELVFKEHSKIERADSTSRPRHQGESSTHSKNDGDKSEQSPFSAQLTRMMDVLDANLETKARLYRDVALSSIFMMNNGRYILQKIKATEIHQSMGDAWSRKKSSDLRTFHNNYKRETWGKLLQCLNPEGLTNNGKVMKPVLKEKFKNFNAMFEEIHKTQSHWMVVDEQLQSELRVSISGVVIPAYRSFLGRYSQYLDPGRQTEKYIKLQPDDIETYIDDLFDGKNPTSMSRKRT 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01878 694 Gene3D Exocyst complex component Exo70 125 691 - -
Bva04g01878 694 MobiDBLite consensus disorder prediction 203 230 - -
Bva04g01878 694 MobiDBLite consensus disorder prediction 1 84 - -
Bva04g01878 694 MobiDBLite consensus disorder prediction 11 25 - -
Bva04g01878 694 SUPERFAMILY Cullin repeat-like 127 682 IPR016159 -
Bva04g01878 694 MobiDBLite consensus disorder prediction 203 242 - -
Bva04g01878 694 MobiDBLite consensus disorder prediction 28 84 - -
Bva04g01878 694 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 68 691 - -
Bva04g01878 694 Pfam Exo70 exocyst complex subunit 309 679 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bva04g01878 694 MobiDBLite consensus disorder prediction 472 501 - -
Bva04g01878 694 MobiDBLite consensus disorder prediction 472 496 - -
Bva04g01878 694 PANTHER EXOCYST COMPLEX PROTEIN EXO70 68 691 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01878 Bva-Chr4 19246993 19249077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01878 47 694 EXO70 exocyst subunit family AT5G13990 50.812 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01878 K07195 - csv:101206040 740.339