Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01866 ATGGATCCCAAGGGCTCAAAGCAAGCACGGGAAGTAGGCAACTTCTTGAGTCTCCCGCAGGCAGAGTCACAAGCTAACATGGGAGAGAATAAACCAGCTGAAGTCAATGATTTCCAGATTACGATTGCAGATaaagaagagaacaagaagCAATTAGCCCCTAAGAGGACTTCGAACAAAGACAGACACACAAAGGTTGAAGGCAGAGGAAGGAGGATAAGGATGCCAGCTCTATGTGCAGCTAGAATTTTTCAGTTGACCAGAGAATTGGGTCACAAATCGGATGGGGAAACTATACAATGGCTATTGCAGCAAGCGGAGCCATCGATAATCGCAGCTACTGGGACAGGAACAATACCGGCATCAGCTCTAGCTGCTGCTGGTGGCTCGGTTTCGCCACAGGGAACCTCTCTATCTGCTGGATTGCATCAGAAAATTGATGAATCAGGAGGGTCCAATATTGGGTCAGCGAGTAGGACCAACTGGGCAATGGTTGGTGGAAATTTGGGGAGACCCCATGTGGCCACTGGTCTATGGCCCTCAGTCACTGGATTTGGGTTCCAGTCGTCATCTGCTCCATCTACAGCAAGTTTAGCCACAGATAGCTCAAATTACCTGCAAAAAGTTGCCTTCCCTGGCTTTGACTTGCCTGCCACCAACATCGGTCCAATGAGTTTCACCTCAATTTTGGGTGGGCCTAACCAGCAGATGCCTGGCTTGGAGCTTGGCTTGTCCCAAGATGGTCACATAGGAGTTTTGAACCCACAAGCCTTGACCCAGCTTTATCAGCAGATGGGTCAAGCTAGAATGCAGCAGCATCAGCATCAGCCTTCTGCCAGGGATGATTCTCAAGGCTCAGGGCATTa 866 0.4873 MDPKGSKQAREVGNFLSLPQAESQANMGENKPAEVNDFQITIADKEENKKQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGGSVSPQGTSLSAGLHQKIDESGGSNIGSASRTNWAMVGGNLGRPHVATGLWPSVTGFGFQSSSAPSTASLATDSSNYLQKVAFPGFDLPATNIGPMSFTSILGGPNQQMPGLELGLSQDGHIGVLNPQALTQLYQQMGQARMQQHQHQPSARDDSQGSGH 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01866 288 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 29 286 - -
Bva04g01866 288 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 29 286 IPR005333 GO:0003700
Bva04g01866 288 ProSiteProfiles TCP domain profile. 59 113 IPR017887 -
Bva04g01866 288 MobiDBLite consensus disorder prediction 1 69 - -
Bva04g01866 288 MobiDBLite consensus disorder prediction 40 69 - -
Bva04g01866 288 MobiDBLite consensus disorder prediction 265 288 - -
Bva04g01866 288 Pfam TCP family transcription factor 57 144 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01866 Bva-Chr4 19176610 19178181 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01866 1 287 TCP Transcription Factor Family AT3G27010 53.251 4.16e-88 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bva04g01866 TCP 1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01866 - - jre:108987051 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01866 04 19176610 19178181 Bva04g01866 04 19176610 19178181 ECH