Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01863 ATGACGACTGTCGCCGCGAATTCCGTCTCCGGTTTTAAGCGATCGATTGGGTTGACGATGCTCCAGCTTCAACCTAAGCCCCCTTCCCCAGCCGTTCCCGTTTCACGCTTCAGgttgaaatttcaaaaaattcagCTCTTCAGAATCAGTTGTGATTACTCTTGCTTTGAAGTTAGAGATCTTGGCTATCAACCTCCAGGAACTCAGTTCGGCCTTTTAAATTCAGTTAGCTTTTCACTTCCAGAGAAGAGTTTTGGCGTAATTTTTGGACAGAGTGGAAGTGGAAAAACAACACTTTTGCAGCTTCTTGCAGGAATAAGCAAACCAACATCAGGGTCCATTTGCATCCAAAAATATGGGAATGATGGCAATCCAAGTCAAGCTCCAGAGCCCTTGATACCAGAAAGGGTCGGTATGGTCTTTCAGTTTCCTGAGAGGTATTTTGTGGCTGATAATGTGCTTGATGAAGTCACTTTTGGGTGGCCAAGGCTAAAGGGAGACCTTCAATTTAAGGAGCATCTTGCTGTAAGACTTCAGAGGGCAATTAACTGGGTTGGACTAAATGAGATCTCCTTGGATAAAGATCCTCACTCCCTCAGTGGTGGTTACCAACGTCGTCTTGCCTTGGCAATACAATtgGTTCAAGTCCCTGACTTATTGATATTGGATGAGCCTCTTGCTGGTCTTGACTGGAAAGCACGGGCAGATGTTGTGAAGCTTCTGAAGCATCTAAAAGAAGAACTAACCGTGCTAGTTGTCAGCCATGATTTgagGGAGTTATCAAGTCTAGTTGATCGGTCTTGGAGGATGGAAATGGGTGGCCGTCTTAAAGAGGATATGCTGCCATTATA 851 0.4395 MTTVAANSVSGFKRSIGLTMLQLQPKPPSPAVPVSRFRLKFQKIQLFRISCDYSCFEVRDLGYQPPGTQFGLLNSVSFSLPEKSFGVIFGQSGSGKTTLLQLLAGISKPTSGSICIQKYGNDGNPSQAPEPLIPERVGMVFQFPERYFVADNVLDEVTFGWPRLKGDLQFKEHLAVRLQRAINWVGLNEISLDKDPHSLSGGYQRRLALAIQLVQVPDLLILDEPLAGLDWKARADVVKLLKHLKEELTVLVVSHDLRELSSLVDRSWRMEMGGRLKEDMLPL 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01863 283 Gene3D - 48 281 IPR027417 -
Bva04g01863 283 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 56 283 IPR003439 GO:0005524
Bva04g01863 283 CDD ABC_cobalt_CbiO_domain1 57 273 IPR015856 GO:0005524|GO:0016020|GO:0055085
Bva04g01863 283 PANTHER HEAVY METAL TRANSPORTER 35 279 - -
Bva04g01863 283 SMART AAA_5 82 274 IPR003593 -
Bva04g01863 283 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 274 IPR027417 -
Bva04g01863 283 Pfam ABC transporter 73 226 IPR003439 GO:0005524
Bva04g01863 283 PANTHER ABC TRANSPORTER I FAMILY MEMBER 11, CHLOROPLASTIC 35 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01863 Bva-Chr4 19154709 19159537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01863 60 260 Calmodulin-binding Proteins AT2G36910 25.121 1.17e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01863 - - jre:108984557 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01863 04 19154709 19159537 Bva04g01863 04 19154709 19159537 ECH