Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01859 ATGGAAAACTATTCCATGTTTCCTTGTCCTTCTTCTAGTACTGCAATGTACAATAATAACCATAATCCAATTTCAACAAGTGCTCTAGGAAGCTCTCATAATCATGGGTTTATCAGTAATCTTGGATATGGTCGACAGATGAGCTCAAATGGGTTCCTGGGTTTGAGGAGTACTGCTGCTACTGATGATCAgaatcatcttcatcttcatcttcatgatAATTTGCAGAAACGATCAGTTGCAGAAGCTGGTAGAGACGTTGATGATTCTGCAGGTAAAAAGAAAGGTGGGAAGAAGGTTAGGAAGCCTAGATATGCTTTTCAAACGAGGAGCCAAGTTGATATACTTGACGATGGATATAGATGGAGGAAATATGGCCAGAAAGCTGTTAAGAACAACAAATTCCCCAGGAGCTATTATCGGTGTACACACCAAGGGTGCATTGTGAAGAAGCAGGTGCAACGCCTAACGAAAGACGAAGGCGTGGTGGTGACTACTTATGAGGGAGTTCACACTCATCAAATTGACAAGACAACTGATAACTTTGAACACATCTTGACTCAGATGCAAATATACACTACAAATCCCTTCTG 593 0.3946 MENYSMFPCPSSSTAMYNNNHNPISTSALGSSHNHGFISNLGYGRQMSSNGFLGLRSTAATDDQNHLHLHLHDNLQKRSVAEAGRDVDDSAGKKKGGKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCIVKKQVQRLTKDEGVVVTTYEGVHTHQIDKTTDNFEHILTQMQIYTTNPF 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01859 197 Pfam WRKY DNA -binding domain 117 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g01859 197 Gene3D WRKY domain 101 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva04g01859 197 ProSiteProfiles WRKY domain profile. 111 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g01859 197 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 82 192 - -
Bva04g01859 197 SMART WRKY_cls 116 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g01859 197 SUPERFAMILY WRKY DNA-binding domain 108 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva04g01859 197 MobiDBLite consensus disorder prediction 76 101 - -
Bva04g01859 197 MobiDBLite consensus disorder prediction 76 95 - -
Bva04g01859 197 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 82 192 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01859 Bva-Chr4 19141052 19142189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01859 104 194 WRKY Transcription Factor Family AT5G13080 85.714 3.84e-55 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva04g01859 WRKY 1.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01859 - - aip:107648396 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01859 04 19141052 19142189 Bva04g01859 04 19141052 19142189 ECH