Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01850 ATGGCCATGGATGTGGAGAAGCAACTTCAATCAGAGTTTCCGTACTGGAAAGCAGTTCGCCGAAAGTTCGGACCAGATTCTCCTTTCTTTGCTGCTGGCAACATCGAGCGTGAACTTCTTGCCAAACAGgTTGCCTTGGAATTAACAGTAGAAGAGAAGGAACAGCTTCAGAATTTATTACATGAGGAAAGCTGGGAAGTCTTCTGTCCCATTGTTGGTTGTGGAGCACGCTTGACTTCTTTGGAGGACTTTGAAGATCATTATAATGCGCGGCATTCTGCATCTTGTTCAGTGTGTTCCAGAGTCTACCCAACTTCACGCTTGCTCAGCATACACGTCTCTGAAGTACatgattctttctttcaagCAAAGGTTGCACGTGGCTATCCCATGTATGAATGCTTAGTGGAAGGCTGTGGTTTGAAGttcaaaaattacaagagTAGACAACAGCATCTGGTTGACAAACATAAGTTCCCCACTTCATATGAGTTTTTTAAGAAGGCCGCCCGACCATCAAAGAAACAGAGGCAAAAACAGCAACGCAAAAAAGCTGTTCATAAGGTGGATGCTTCAAGAATGATGGAAGTGGAAAACGCAGCCATTGATGACCTCACATCAGCAGTCTCTAAATTGAGCACTTCTGACAGTCCTTCTTCTATCAGCTTCGGTCGCCGTCACACCCGTGGCTTAACATTTGTCCCCCGATCCATTCAACGCGAAAGTGGATCAAATATGGCATCGCCACAAATGAAGAGATA 761 0.435 MAMDVEKQLQSEFPYWKAVRRKFGPDSPFFAAGNIERELLAKQVALELTVEEKEQLQNLLHEESWEVFCPIVGCGARLTSLEDFEDHYNARHSASCSVCSRVYPTSRLLSIHVSEVHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSYEFFKKAARPSKKQRQKQQRKKAVHKVDASRMMEVENAAIDDLTSAVSKLSTSDSPSSISFGRRHTRGLTFVPRSIQRESGSNMASPQMKR 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01850 253 PANTHER ZINC FINGER PROTEIN 511 9 242 - -
Bva04g01850 253 PANTHER UNCHARACTERIZED 9 242 IPR039258 -
Bva04g01850 253 MobiDBLite consensus disorder prediction 209 253 - -
Bva04g01850 253 ProSitePatterns Zinc finger C2H2 type domain signature. 134 157 IPR013087 -
Bva04g01850 253 MobiDBLite consensus disorder prediction 209 226 - -
Bva04g01850 253 ProSitePatterns Zinc finger C2H2 type domain signature. 96 117 IPR013087 -
Bva04g01850 253 MobiDBLite consensus disorder prediction 235 253 - -
Bva04g01850 253 SMART c2h2final6 67 92 IPR013087 -
Bva04g01850 253 SMART c2h2final6 94 117 IPR013087 -
Bva04g01850 253 SMART c2h2final6 132 157 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01850 1 248 C2H2 Transcription Factor Family AT5G14140 62.646 9.16e-113 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva04g01850 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01850 - - qsu:112032268 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01850 04 19111611 19113899 Bva04g01850 04 19111611 19113899 ECH