Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva04g01838 | atggCGGGAGAAGAGGAATTGAAGCAGAGCATATCATCATGgccaaattcttcttcttcttccccttctTCTCCTCTGAGAACTAAAATGGACCAAAAATGTTGGAGAATGCAAGCGGACGAGAATCTGAAGAGGCTCCAATCACTTCTCTTCGGCGCCGATCTTGCCCTCGAGAAGCAGGACTTCTCCTCTGCTCAGATCCTCGGCCTTAGCCTCGTTGGCTTCCTTGACTCTCACTGTCATTCCGATGTTGACGAAGCCTTTATACGTCCTATTCGCCGCGAAGCTTTTTCGAGGATTGAAGCTGCTCGCCAATCTCTCATTCCAGACTCCGATCGTCAAGCGTTTGAACAAGCAAAGAAGTCTCCGGGATGCATTTTTGGCATAGCTGGAGGTTTTGACATTGAGAAGATTAAGAAGTCAAAGTACTTTCAAGCTCTTCTGAAACAGTCCAATGTAAAGGCTGAGATTCAATTGGGCAACGAACTgcaaaaagaagacaaatcaGGAAGTAAAGTGCCAAAAGAAACGACGCAAGCAAAATTGACATCAATGTATGGGAAAAGCACCTTCAGGACTAATAATGGTTCCAAGAGTTCtttgaactttaaaaataacaactatGAAGATTGCATGATTGTTGAAAAGCCTCAATCACACACCAATCGCACAAAGGATCATGCtgcctcttctttcttcaaaacTGACGGGGAAGAGAGAATTTATGGGAACACTTTTGGTACAAAACGTGTACATATGGAGATTGGTAATGCAAAGTCCCCTTCAAGCAACGAGGAAGTAAACCCTGATGTTTGTGGAAATGGGTTTGTCACTGCCAGAGCAAAATTGGAAATGGAAGCAAGGCAAAAGCGAGGGGCAGTGGGTTCACCTAGTGCATCAGTCTCACCACAGTGTGATAACAATTCTCCCAGTAGGTTTTACGGTGGAAGATCCTATGGCACTTCACGACGTGCTGTCCGTGGAAATTTTGTTCCCCCTGTTAAATCCAATGGGAACAATGTTGGAAATATGTCTTCACGAAATTCCGGAAAGTGTGATGATGTTTTGGATGACTCAACAAAGAGATGTTTGGAAATGCTATGTGGCCCCGATGGTGAGCTTCCTGAGAAATTGAGGAACTTGGAACCTCGGCTTATTGAACATGTTAGTAACGAGATTATGAATAGAGACCCGAATGTTCGATGGGACGACATTGCGGGGTTGGAGCATGCAAAGAAATGTGTCACTGAGATGGTTATATGGCCTCTGCTACGTCCTGACATATTTAAGGGTTGTCGTTCTCCTGGGAGAGGTCTGCTTCTATTTGGTCCACCTGGAACTGGTAAAACAATGATCGGAAAAGCCATAGCTGGGGAGGCGAAGGcaacctttttttatatatcagcAAGTTCCTTGACTAGCAAGTGGATTGGTGAGGGTGAAAAGCTAGTGAGAGCACTTTTTGGAGTTGCCAGTTGTCGTCAGCCGGCagtaatttttgttgatgaaattGATTCCCTCCTGTCCCAGCGTAAATCAGAGGGCGAACATGAATCAAGTAGACGACTGAAGACGCAGTTTCTTATTGAAATGGAAGGTTTTGACAGTGGTAGCGAGCAAATTCTGCTTATAGGGGCAACAAATCGTCCTCAAGAACTTGATGAGGCGGCACGGAGGCGACTTACCAAAAGACTTTATATTCCCTTACCATCTTCAGAAGCTAGAGCATGGATTGTGCGTAACCTCTTAGAGAAGGATGGATTATTCAAGCTCTCAAACGAGGAAATTGACACCATATGCAACCTAACTGAAGGTTATTCAGGATCAGACATGAAAAACTTAGTGAAGGATGCTTCTATGGGTCCCCTTAGAGAGGCTTTAAGACAAGGCATAGAAATTACCAAGTTGAAAAAGGAGGACATGCGGCCAGTAAATCTTCAGGACTTTGAGACTGCACTACAAGAGGTGAGGCCCTCTGTTTCCTCAAATGAACTTGGCACATACGATGAATGGAATAAGCAATTTGGAAGCCTATCACTGTA | 2042 | 0.4212 | MAGEEELKQSISSWPNSSSSSPSSPLRTKMDQKCWRMQADENLKRLQSLLFGADLALEKQDFSSAQILGLSLVGFLDSHCHSDVDEAFIRPIRREAFSRIEAARQSLIPDSDRQAFEQAKKSPGCIFGIAGGFDIEKIKKSKYFQALLKQSNVKAEIQLGNELQKEDKSGSKVPKETTQAKLTSMYGKSTFRTNNGSKSSLNFKNNNYEDCMIVEKPQSHTNRTKDHAASSFFKTDGEERIYGNTFGTKRVHMEIGNAKSPSSNEEVNPDVCGNGFVTARAKLEMEARQKRGAVGSPSASVSPQCDNNSPSRFYGGRSYGTSRRAVRGNFVPPVKSNGNNVGNMSSRNSGKCDDVLDDSTKRCLEMLCGPDGELPEKLRNLEPRLIEHVSNEIMNRDPNVRWDDIAGLEHAKKCVTEMVIWPLLRPDIFKGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSEGEHESSRRLKTQFLIEMEGFDSGSEQILLIGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIVRNLLEKDGLFKLSNEEIDTICNLTEGYSGSDMKNLVKDASMGPLREALRQGIEITKLKKEDMRPVNLQDFETALQEVRPSVSSNELGTYDEWNKQFGSLSL | 680 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva04g01838 | 680 | MobiDBLite | consensus disorder prediction | 291 | 313 | - | - | |
Bva04g01838 | 680 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Bva04g01838 | 680 | Pfam | AAA+ lid domain | 596 | 641 | IPR041569 | - | |
Bva04g01838 | 680 | Gene3D | - | 398 | 672 | IPR027417 | - | |
Bva04g01838 | 680 | MobiDBLite | consensus disorder prediction | 9 | 28 | - | - | |
Bva04g01838 | 680 | PANTHER | AAA DOMAIN-CONTAINING | 90 | 677 | - | - | |
Bva04g01838 | 680 | CDD | AAA | 432 | 569 | - | - | |
Bva04g01838 | 680 | MobiDBLite | consensus disorder prediction | 333 | 350 | - | - | |
Bva04g01838 | 680 | ProSitePatterns | AAA-protein family signature. | 541 | 560 | IPR003960 | GO:0005524|GO:0016887 | |
Bva04g01838 | 680 | MobiDBLite | consensus disorder prediction | 328 | 352 | - | - | |
Bva04g01838 | 680 | Pfam | Vps4 C terminal oligomerisation domain | 642 | 676 | IPR015415 | - | |
Bva04g01838 | 680 | Gene3D | - | 570 | 656 | - | - | |
Bva04g01838 | 680 | Pfam | ATPase family associated with various cellular activities (AAA) | 439 | 569 | IPR003959 | GO:0005524|GO:0016887 | |
Bva04g01838 | 680 | SMART | AAA_5 | 435 | 571 | IPR003593 | - | |
Bva04g01838 | 680 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 398 | 675 | IPR027417 | - | |
Bva04g01838 | 680 | MobiDBLite | consensus disorder prediction | 295 | 313 | - | - | |
Bva04g01838 | 680 | PANTHER | FIDGETIN-LIKE PROTEIN 1 | 90 | 677 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva04g01838 | Bva-Chr4 | 19067165 | 19072276 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva04g01838 | 376 | 678 | Calmodulin-binding Proteins | AT3G56690 | 32.468 | 2.60e-42 | 163 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva04g01838 | 04 | 19067165 | 19072276 | Bva04g01838 | 04 | 19067165 | 19072276 | ECH |