Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01838 atggCGGGAGAAGAGGAATTGAAGCAGAGCATATCATCATGgccaaattcttcttcttcttccccttctTCTCCTCTGAGAACTAAAATGGACCAAAAATGTTGGAGAATGCAAGCGGACGAGAATCTGAAGAGGCTCCAATCACTTCTCTTCGGCGCCGATCTTGCCCTCGAGAAGCAGGACTTCTCCTCTGCTCAGATCCTCGGCCTTAGCCTCGTTGGCTTCCTTGACTCTCACTGTCATTCCGATGTTGACGAAGCCTTTATACGTCCTATTCGCCGCGAAGCTTTTTCGAGGATTGAAGCTGCTCGCCAATCTCTCATTCCAGACTCCGATCGTCAAGCGTTTGAACAAGCAAAGAAGTCTCCGGGATGCATTTTTGGCATAGCTGGAGGTTTTGACATTGAGAAGATTAAGAAGTCAAAGTACTTTCAAGCTCTTCTGAAACAGTCCAATGTAAAGGCTGAGATTCAATTGGGCAACGAACTgcaaaaagaagacaaatcaGGAAGTAAAGTGCCAAAAGAAACGACGCAAGCAAAATTGACATCAATGTATGGGAAAAGCACCTTCAGGACTAATAATGGTTCCAAGAGTTCtttgaactttaaaaataacaactatGAAGATTGCATGATTGTTGAAAAGCCTCAATCACACACCAATCGCACAAAGGATCATGCtgcctcttctttcttcaaaacTGACGGGGAAGAGAGAATTTATGGGAACACTTTTGGTACAAAACGTGTACATATGGAGATTGGTAATGCAAAGTCCCCTTCAAGCAACGAGGAAGTAAACCCTGATGTTTGTGGAAATGGGTTTGTCACTGCCAGAGCAAAATTGGAAATGGAAGCAAGGCAAAAGCGAGGGGCAGTGGGTTCACCTAGTGCATCAGTCTCACCACAGTGTGATAACAATTCTCCCAGTAGGTTTTACGGTGGAAGATCCTATGGCACTTCACGACGTGCTGTCCGTGGAAATTTTGTTCCCCCTGTTAAATCCAATGGGAACAATGTTGGAAATATGTCTTCACGAAATTCCGGAAAGTGTGATGATGTTTTGGATGACTCAACAAAGAGATGTTTGGAAATGCTATGTGGCCCCGATGGTGAGCTTCCTGAGAAATTGAGGAACTTGGAACCTCGGCTTATTGAACATGTTAGTAACGAGATTATGAATAGAGACCCGAATGTTCGATGGGACGACATTGCGGGGTTGGAGCATGCAAAGAAATGTGTCACTGAGATGGTTATATGGCCTCTGCTACGTCCTGACATATTTAAGGGTTGTCGTTCTCCTGGGAGAGGTCTGCTTCTATTTGGTCCACCTGGAACTGGTAAAACAATGATCGGAAAAGCCATAGCTGGGGAGGCGAAGGcaacctttttttatatatcagcAAGTTCCTTGACTAGCAAGTGGATTGGTGAGGGTGAAAAGCTAGTGAGAGCACTTTTTGGAGTTGCCAGTTGTCGTCAGCCGGCagtaatttttgttgatgaaattGATTCCCTCCTGTCCCAGCGTAAATCAGAGGGCGAACATGAATCAAGTAGACGACTGAAGACGCAGTTTCTTATTGAAATGGAAGGTTTTGACAGTGGTAGCGAGCAAATTCTGCTTATAGGGGCAACAAATCGTCCTCAAGAACTTGATGAGGCGGCACGGAGGCGACTTACCAAAAGACTTTATATTCCCTTACCATCTTCAGAAGCTAGAGCATGGATTGTGCGTAACCTCTTAGAGAAGGATGGATTATTCAAGCTCTCAAACGAGGAAATTGACACCATATGCAACCTAACTGAAGGTTATTCAGGATCAGACATGAAAAACTTAGTGAAGGATGCTTCTATGGGTCCCCTTAGAGAGGCTTTAAGACAAGGCATAGAAATTACCAAGTTGAAAAAGGAGGACATGCGGCCAGTAAATCTTCAGGACTTTGAGACTGCACTACAAGAGGTGAGGCCCTCTGTTTCCTCAAATGAACTTGGCACATACGATGAATGGAATAAGCAATTTGGAAGCCTATCACTGTA 2042 0.4212 MAGEEELKQSISSWPNSSSSSPSSPLRTKMDQKCWRMQADENLKRLQSLLFGADLALEKQDFSSAQILGLSLVGFLDSHCHSDVDEAFIRPIRREAFSRIEAARQSLIPDSDRQAFEQAKKSPGCIFGIAGGFDIEKIKKSKYFQALLKQSNVKAEIQLGNELQKEDKSGSKVPKETTQAKLTSMYGKSTFRTNNGSKSSLNFKNNNYEDCMIVEKPQSHTNRTKDHAASSFFKTDGEERIYGNTFGTKRVHMEIGNAKSPSSNEEVNPDVCGNGFVTARAKLEMEARQKRGAVGSPSASVSPQCDNNSPSRFYGGRSYGTSRRAVRGNFVPPVKSNGNNVGNMSSRNSGKCDDVLDDSTKRCLEMLCGPDGELPEKLRNLEPRLIEHVSNEIMNRDPNVRWDDIAGLEHAKKCVTEMVIWPLLRPDIFKGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSEGEHESSRRLKTQFLIEMEGFDSGSEQILLIGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIVRNLLEKDGLFKLSNEEIDTICNLTEGYSGSDMKNLVKDASMGPLREALRQGIEITKLKKEDMRPVNLQDFETALQEVRPSVSSNELGTYDEWNKQFGSLSL 680
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01838 680 MobiDBLite consensus disorder prediction 291 313 - -
Bva04g01838 680 MobiDBLite consensus disorder prediction 1 30 - -
Bva04g01838 680 Pfam AAA+ lid domain 596 641 IPR041569 -
Bva04g01838 680 Gene3D - 398 672 IPR027417 -
Bva04g01838 680 MobiDBLite consensus disorder prediction 9 28 - -
Bva04g01838 680 PANTHER AAA DOMAIN-CONTAINING 90 677 - -
Bva04g01838 680 CDD AAA 432 569 - -
Bva04g01838 680 MobiDBLite consensus disorder prediction 333 350 - -
Bva04g01838 680 ProSitePatterns AAA-protein family signature. 541 560 IPR003960 GO:0005524|GO:0016887
Bva04g01838 680 MobiDBLite consensus disorder prediction 328 352 - -
Bva04g01838 680 Pfam Vps4 C terminal oligomerisation domain 642 676 IPR015415 -
Bva04g01838 680 Gene3D - 570 656 - -
Bva04g01838 680 Pfam ATPase family associated with various cellular activities (AAA) 439 569 IPR003959 GO:0005524|GO:0016887
Bva04g01838 680 SMART AAA_5 435 571 IPR003593 -
Bva04g01838 680 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 398 675 IPR027417 -
Bva04g01838 680 MobiDBLite consensus disorder prediction 295 313 - -
Bva04g01838 680 PANTHER FIDGETIN-LIKE PROTEIN 1 90 677 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bva04g01838 Bva-Chr4 19067165 19072276 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01838 376 678 Calmodulin-binding Proteins AT3G56690 32.468 2.60e-42 163
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01838 04 19067165 19072276 Bva04g01838 04 19067165 19072276 ECH