Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01832 ATGCCGGAGGAGACAACATCTATCGACTATGTGATGGAGGCAGCTTCCGGGCCCCACCTCTCGGGGCTCCGTCTTGATGGCCTCCTTTCTTCTCCgccttcttcatcttcttcatctcctGCTCAtcgtttttcttcttcagctgCTGCTGCTTCTGCTCTGGATTCTTCCCTAGCCCCTGACTCTGCTCCCTCACCGCCCTTCGTTATCGGAGTTTCGGGAGGTACTGCATCAGGTAAGACCACAGTATGTGATATGATCATTCAACAGCTTCACGATCACCGCGTTGTGCTCGTCAATCAGGACTCATTCTACCGAGGTTTGACACCTGAGGAGTTGCTACGCGTGCATGAGTACAATTTTGATCATCCAGaTTCTGATAGTTACACATTGCTGTTCATTTTAGATGCCTTTGACACCGAACAGCTATTAGAATGCACACGACAACTCATTGCTGGCCACTCTGTCCAAGTCCCTGTTTATGACTTTAAGAAGCACCAGCGCTCTTCGGATAGTTTTCGGCAGGTCAATGCTTCTGATGTCATCATATTGGAGGGAATTTTGGTTTTCCATGACCAACGCGTTCGTGATCTGATGAACATGAAAATCTTTGTTGACACAGACGCTGACGTCAGGCTTGCTCGTAGAATTCGACGTGATACAGTGGAGAGGGGCAGGGATATAAACTCTGTTCTTGAACAGTACGCAAAGTTTGTCAAGCCTGCCTTCGATGATTTTATTCTGCCATCAAAGAAGTACGCTGATGTGATCATTCCACGAGGAGGTGATAATCATGTTGCTATTGATCTGATTGTGCAACATATCGGCAcaaaacttggtcaacatgaTCTATGCAAAATATATCCAAACGTGTATGTCATTCAGTCAACATTCCAGataAGAGGAATGCATACGTTAATTCGTGACCGTAACATATCAAAGCATGACTTCGTGTTTTATTCAGATCGACTTATCCGTCTGGTTGTTGAACATGGCCTTGGTCATTTACCATTCACAGAAAAACAAGTAGTTACTCCGACAGGATCTGTCTATACTGGCGTTGACTTCTGCAAGAAGTTGTGTGGCGTTTCAATTGTTCGAAGTGGTGAGAGCATGGAAAATGCATTGCGTGCTTGTTGCAAAGGCattaaaattggaaaaatccTGATTCACCGAGATGGAGACAATGGAAAACAGCTTATATATGAGAAGCTTCCCAAGGATATTTCAGAACGTCATGTCTTGCTTCTTGATCCAGTCCTGGCTACAGGTAATTCTGCAAACCAAGCAATTGAGTTACTCATCCAGAAAGGAGTTCCAGAATCTCACATAATTTTCCTGAATCTCATCTCTGCTCCCGAGGGAATCCACTGCGTGTGTAAAAGGTTTCCATCATTGAAAATTGTCACGTCCGAGATTGACGTTGCAATAAATGAAGAGTTCCGTGTTGTCCCCGGCATGGGCGAGTTTGGAGATCGCTACTTTGGAACTGACGATTG 1499 0.429 MPEETTSIDYVMEAASGPHLSGLRLDGLLSSPPSSSSSSPAHRFSSSAAAASALDSSLAPDSAPSPPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTPEELLRVHEYNFDHPDSDSYTLLFILDAFDTEQLLECTRQLIAGHSVQVPVYDFKKHQRSSDSFRQVNASDVIILEGILVFHDQRVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFILPSKKYADVIIPRGGDNHVAIDLIVQHIGTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDRNISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVAINEEFRVVPGMGEFGDRYFGTDD 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01832 499 PANTHER URIDINE KINASE-LIKE PROTEIN 2, CHLOROPLASTIC 16 496 IPR029930 GO:0004849|GO:0044206
Bva04g01832 499 CDD UMPK 69 278 IPR000764 -
Bva04g01832 499 PRINTS Uridine kinase signature 224 235 - -
Bva04g01832 499 PRINTS Uridine kinase signature 210 220 - -
Bva04g01832 499 PRINTS Uridine kinase signature 153 168 - -
Bva04g01832 499 PRINTS Uridine kinase signature 67 84 - -
Bva04g01832 499 PRINTS Uridine kinase signature 246 259 - -
Bva04g01832 499 Gene3D - 282 497 IPR029057 -
Bva04g01832 499 SUPERFAMILY PRTase-like 281 498 IPR029057 -
Bva04g01832 499 CDD PRTases_typeI 355 470 IPR000836 -
Bva04g01832 499 TIGRFAM udk: uridine kinase 68 278 IPR000764 -
Bva04g01832 499 Pfam Phosphoribulokinase / Uridine kinase family 69 266 IPR006083 GO:0005524|GO:0016301
Bva04g01832 499 Gene3D - 65 281 IPR027417 -
Bva04g01832 499 PANTHER URIDINE KINASE 16 496 - -
Bva04g01832 499 Pfam Uracil phosphoribosyltransferase 296 497 - -
Bva04g01832 499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 271 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01832 Bva-Chr4 19029790 19036069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01832 1 499 PRT Gene Family AT5G40870 83.166 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01832 K00876 - gmx:100786137 830.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01832 04 19029790 19036069 Bva04g01832 04 19029790 19036069 ECH
Bva03g00307 03 1831048 1836533 Bva04g01832 04 19029790 19036069 ECH