Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01824 ATGCTCCTAGCTGGTTCAATGGCACACTTTTGTCTTCATCTTATCCTTCTTGCATCGTTTTTGTTTATTCCAAGTACCCATGAACTACAAGCTGCTCAGACTCAAGTCTTGTTGCGGCTAAGGAAACATCTGGAGTACCCTGCCTCCTTGGAAATTTGGGGAACTTACACCGGTGACTTCTGTAACCTTTCTCCATCAGCTCATATGAGTATTAAATGTCAGGATAATTCTGTAACTGAGCTTAAAATTATGGGAGATAAACCTGTCAAGGCAAATGGCTTCAACGGATTTGCAATTTCCAACCAAACACTATCTGCGAGCTTCTCTATTGATTCTTTTGTTACCACATTGACAAGGTTAACCAGCTTAAGGGTTCTTAGCTTGGTGTCTTTGGGGATTTGGGGGCCACTCTCTGATAAGATTCATCGATTATCTTTTCTTGAAGTTCTGGACTTGAGCTCAAACTTCTTATTCGATTTTATTCCAGAAAAAATAGCCACAATGGTAAAATTTGAAACGCTAATACTTGatgacaattattttaatggcAGTATGCCAGATTGGTTTGACTCATTATCTAATCTTACTGTCTTGAGTTTGAAGAGCAACCGCTTAAAGGGTTCATTCCCCTCCTCATTGTGCAGAATTAAGACCCTCACTGATATTTCCTTGTCTCACAATGAGCTTTCTGGTGGATTGCCTGATCTGAGTGGTCTCACTGGCCTACGTGTACtgaatttaagagaaaatcaTTTAGATTCTGAACTACCACTAATGCCCAAGGGAGTAGTTTCAGTTCTTCTAAGCCAAAATGAATTCTCTGGTAAGATACCCAGGCAGTTTGCTGAATTGGGTCAGCTTCAACATCTAGATCTTTCATCAAATCATCTGAGTGTAGTCCCTCCATCTGCCTTGTTCGCTTTGTCAAACCTCAGTTATTTGAACTTAGCAAGCAATATGCTGAGTGGGTCACTTCCAGACCAACTAAGTTGTGGCAGCAAACTTGGGTTTGTGGATATTTCTAGTAACAAGTTAATTGGTCGACTTCCTTCTTGCTTAGCCAACACTTCTGATAGAAGAGTTGTCAAATATGATGGAAATTGTTTGTCTATTGATTCTCAGCATCAGCAGCGAGGTTCTTATTGCAAAGAATCCAGTTCTGGGTGGAAAAAATTTGCGGCATGGAAAATAGTTGTAGTAGTGGCCATTATTATTGGACTTGTTCTTGTGCTTGCGCTTTTGGCGTTTGGAGTTCTCTATTTTAGAAGATACCATTCGAGAAAGACACCTGAGCAGCGCCTGTTGCCAAAGATTATGCAAGATAATTCCACAACTGGGATTTCCTCTGAACTCCTTGCAAATGCCAGAATAATTTCGCAAGCAGTGAAGCTAGGGACACAGACTAGTCCAATTTGCCGACTGTTTTCAATTGAAGAGTTGAAGGAAGCCACAAAAAATTTCCACCCTTCAACGTTTATTGGTGAAGGCTCCATAGGGAAGCTGTACAAAGGTAAACTGGAGAATGGATCCTATGTGGCTATACGATCTCTGGCTTTGTCAAAGAAATACTTAATTCAAAATCTCAAAGCTAGGTTAGATCTTCTCTCAAAGCTTCACCATCCAAATTTGGTTACGCTCTTGGGTCATTGCATTGATAGTAGTGGACAAGATGGCCCTGGTACTCACAAAGTCCACCTTGTATATGAGTATGTACCAAATGGGAATTATCGTGCCCATCTGTCAGATTTTTCTGCAGATAAAGCCCTTAAATGGTCTGATAGATTGGCAATTTTAATTGGAGTAGCCAAAGCTGTCCATTTTTTACATACTGGGGTAATTCCAGGTTGTTTTAATAACCAATTGAAGACAAACAATATCTTGCTTGATGAGCATCGCATTCCGAAACTAAGTGACTATGGGATGTCCATCATCAGAGAAGAGATCGAAAAGCCCGAGGCAAAGGGAGAGCGCCCAAAATCATGCCATGGGAGAAAGTTAGAGGAtgatgtttataattttgggTTCATATTGTTTGAATCACTTGTTGGACCTATAGCAATCGATAAAGGAGAAACATTTTTCCTAAATGAAAAGGCATCGTTTGGCAGTCAAGATGGTCGAAAGAAAATCTTGGATCCAGTAGTGTTGACCACTTGTTGCCAAGAGTCATTATCAATTGCAGTCTCCATAACAACAAAATGCATATCTCAGGAACCATCATCTCGTCCCTCTTTTGAAGATGTTTTATGGAACTTAAAGTATGCAGCTCAAGTCCAGGCCACAGCAGATGCTGATCAGAAATCAGATTCTGCATACCCTTTAGGAAGCACAACTCCTGGGATTCATTCAAGTCCCTG 2357 0.3992 MLLAGSMAHFCLHLILLASFLFIPSTHELQAAQTQVLLRLRKHLEYPASLEIWGTYTGDFCNLSPSAHMSIKCQDNSVTELKIMGDKPVKANGFNGFAISNQTLSASFSIDSFVTTLTRLTSLRVLSLVSLGIWGPLSDKIHRLSFLEVLDLSSNFLFDFIPEKIATMVKFETLILDDNYFNGSMPDWFDSLSNLTVLSLKSNRLKGSFPSSLCRIKTLTDISLSHNELSGGLPDLSGLTGLRVLNLRENHLDSELPLMPKGVVSVLLSQNEFSGKIPRQFAELGQLQHLDLSSNHLSVVPPSALFALSNLSYLNLASNMLSGSLPDQLSCGSKLGFVDISSNKLIGRLPSCLANTSDRRVVKYDGNCLSIDSQHQQRGSYCKESSSGWKKFAAWKIVVVVAIIIGLVLVLALLAFGVLYFRRYHSRKTPEQRLLPKIMQDNSTTGISSELLANARIISQAVKLGTQTSPICRLFSIEELKEATKNFHPSTFIGEGSIGKLYKGKLENGSYVAIRSLALSKKYLIQNLKARLDLLSKLHHPNLVTLLGHCIDSSGQDGPGTHKVHLVYEYVPNGNYRAHLSDFSADKALKWSDRLAILIGVAKAVHFLHTGVIPGCFNNQLKTNNILLDEHRIPKLSDYGMSIIREEIEKPEAKGERPKSCHGRKLEDDVYNFGFILFESLVGPIAIDKGETFFLNEKASFGSQDGRKKILDPVVLTTCCQESLSIAVSITTKCISQEPSSRPSFEDVLWNLKYAAQVQATADADQKSDSAYPLGSTTPGIHSSP 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01824 785 Pfam Leucine rich repeat 286 345 IPR001611 GO:0005515
Bva04g01824 785 Pfam Leucine rich repeat 172 229 IPR001611 GO:0005515
Bva04g01824 785 MobiDBLite consensus disorder prediction 762 785 - -
Bva04g01824 785 ProSiteProfiles Leucine-rich repeat profile. 286 307 IPR001611 GO:0005515
Bva04g01824 785 SUPERFAMILY Protein kinase-like (PK-like) 468 752 IPR011009 -
Bva04g01824 785 Gene3D Ribonuclease Inhibitor 263 387 IPR032675 -
Bva04g01824 785 ProSiteProfiles Protein kinase domain profile. 487 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01824 785 Gene3D Ribonuclease Inhibitor 30 262 IPR032675 -
Bva04g01824 785 SUPERFAMILY L domain-like 117 369 - -
Bva04g01824 785 PANTHER OS07G0166700 PROTEIN 10 770 IPR045272 GO:0004714|GO:0006468
Bva04g01824 785 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 10 770 - -
Bva04g01824 785 Pfam Leucine Rich Repeat 147 163 IPR001611 GO:0005515
Bva04g01824 785 SMART LRR_typ_2 308 332 IPR003591 -
Bva04g01824 785 SMART LRR_typ_2 144 168 IPR003591 -
Bva04g01824 785 SMART LRR_typ_2 192 216 IPR003591 -
Bva04g01824 785 SMART LRR_typ_2 284 307 IPR003591 -
Bva04g01824 785 SMART LRR_typ_2 239 262 IPR003591 -
Bva04g01824 785 Pfam Protein tyrosine and serine/threonine kinase 492 750 IPR001245 GO:0004672|GO:0006468
Bva04g01824 785 Gene3D Transferase(Phosphotransferase) domain 1 571 773 - -
Bva04g01824 785 Gene3D Phosphorylase Kinase; domain 1 449 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01824 Bva-Chr4 18987601 18992360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01824 12 700 Miscellaneous Gene Families AT5G14210 59.227 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Bva04g01824 PK_Tyr_Ser-Thr 9.9e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01824 - - gmx:100780663 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01824 04 18987601 18992360 Bva04g01824 04 18987601 18992360 ECH
Bva03g00316 03 1880114 1884735 Bva04g01824 04 18987601 18992360 ECH