Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01822 ATGACTGTGTTCTCGGCCAAGCAAGTTTTTCCGGTTGACTATGAGGCCGAGGTCTCTCAGTGCCTTCTCGAAGCTTCTCACTCTGGCGATCTGAGCTTGGCGTTAGAGTGCATTGCCGATCCGTTCGTCGACGTCAACTTCGTTGGCGCAGTGAGCTTGAAGAGCAGGAAGGCTGAAGTAGTTCTACACGATGAATCGCCGAGCGAAGTTCGCTTTGAGCATGAGGAATTCAAGACCGACGTCACGGCACTCTTTCTCGCCGTTCATGCTGGAAAAGCTAGTCTCGTGAGGAAGTTACTGAGTATGGGAGCTGATGTGAATCAGAAACTCTTCAGAGGCTTTGCAATTACAGCGGCAGTGAGGGAGGGCCACCTTAATACTCTTGAGATCTTACTTAAGGCCGGAGCATCGCAGCCAGCATGTGAAGAAGCCCTGCTGGAGGCAAGCTGCCACGGGCAAGCAAAATTTGCGGAGTTACTACTGAGCTCTGATTTGATCCGACCCCATATTGCTGTACATGCTCTCGTGTCTGCATGCTGCAGAGGGTTTGTAGAAGTGGTCGAGACGCTCATAAAGTTTGGTGTTGATGCGAATGCAGCGGATCGGGTGCTTTTACAGTCATTGACGCCTTCTCTCCATGCAAATGTTGACTGTACTGCACTTATTGCTGCGGTGATTCATAGACAGGTCCCTGTCGTCCGTTTGCTATTGcagGCTAGTGCAAAGATAGACAACAAAGTGACGCTAGGTGCATGGTCATGGGACACTTCAACAGGTGAAGAGCTTCGCGTGGGTGCTGGACTCGGAGAACCTTATGACATAACCTGGTGTGCGGTTGAGTATTTTGAAAGGAGCGGCGCAATACTGCGCATACTCCTGCAACACTTCTCCTTTAATACCCTTAACCGTGGAAGAACCATCCTACACCATGCCATTCTTTGTGGCAACGTTGAGGCTGTCAGAATACTCTTGGAATGTAAGGCTGATGTTGAATCCCCAGTTAAAACAATTGGGAAGACTGTGTTCCGTCCAATACACATGGCTTCTCGTCTCGGCTTCTCAACAATTGTTCAATGCCTAATTGATTTTGGTTGTGATGTGAATTCTGTGACCGATTGCGGGGACACGGCTTTGATGATCGCTGCAAAATACAAACAAGAGAAATGCCTCAAAGTGCTGACAATGGCTAGTGCTGATTTTGGCTTGGTGAATGCTGCTGGCCACTCCGCGAGTTCAATTGCTGAGTCAAACCAGTGGTCACTTGGTTTTCAGCAGGCAGTATTGGATACAATCAGAAACGGGTTGATACCGAGATCTAGCAATACCTCGGTATTCTCGCCTCTAATGTTTGCAGCTCAAGCTGGTGATACTGGAGCATTGAAAGTTGTAATTGGTTCTGGAGGATTTGATCTTGACTATCAAGATGATAATGGTTTTACTGCAGTTACGGTTACTGCTTTGAAGGGTCACGTGGAAGCGTTTAGACTGCTTGTATACGCTGGAGCAGACGTGAAACTATACAATAAATCTGGTGAAACAGCAATTAATTTATCCGTTTCGAATCAGAATCGTGATTTGTTTGAAAAGGTCATGCTGGAATTTGCACTCGAAAAAGGCAATCGCAATGCAGGTGGcttctatgctttacattgtGCAGCTCGTCACGGTGACTTGGATGCCGTTAAATTGCTCACTAGCAAAGGTTATGACATAGATGTCCCTGATGGGGAGGGCTACACTCCGCTCATGTTAGCCGCAAAGGAAGGGTATGGGTCCATCTGTGAGCACTTAATTTCTTATGGGGCCAATTGCAATACCAAGAATGCTAGAGGTGAAACTGCACTTTCACTTGCAAGGAAATACTTTGGAGGAAAAAACGAAGCCGAGGCTGTAATATTAGACGAGCTTGCTCGCAAATTGGTACTAGATGGTGCCTATGTCCAGAAGCACACTAGGGGTGGGAAGGGCTCGCCACAtggtaaagaaattaagatgGGATCCACAGGAGTGCTGCGTTGGGGGAATTCAAGCCGGAGAAATGTGATATGCTGTGTGGCAGAGTTGGGGCCAAGCTTAGCTTTCCGGAGAAATAGGCACAAAAAAGGTGATGCTGATGACCCTGGAATATTTAGGGTGCTAACCACCAAGAACAAGGAAGTGCATTTTGTGTGTGATGGGGGATCGGAAGCTGCTCAACTTTGGGTAAGGGGTATAAAACTTATAACCAAACAAGCTACTTTCCGTGAGCGGGGATACCTATA 2261 0.4684 MTVFSAKQVFPVDYEAEVSQCLLEASHSGDLSLALECIADPFVDVNFVGAVSLKSRKAEVVLHDESPSEVRFEHEEFKTDVTALFLAVHAGKASLVRKLLSMGADVNQKLFRGFAITAAVREGHLNTLEILLKAGASQPACEEALLEASCHGQAKFAELLLSSDLIRPHIAVHALVSACCRGFVEVVETLIKFGVDANAADRVLLQSLTPSLHANVDCTALIAAVIHRQVPVVRLLLQASAKIDNKVTLGAWSWDTSTGEELRVGAGLGEPYDITWCAVEYFERSGAILRILLQHFSFNTLNRGRTILHHAILCGNVEAVRILLECKADVESPVKTIGKTVFRPIHMASRLGFSTIVQCLIDFGCDVNSVTDCGDTALMIAAKYKQEKCLKVLTMASADFGLVNAAGHSASSIAESNQWSLGFQQAVLDTIRNGLIPRSSNTSVFSPLMFAAQAGDTGALKVVIGSGGFDLDYQDDNGFTAVTVTALKGHVEAFRLLVYAGADVKLYNKSGETAINLSVSNQNRDLFEKVMLEFALEKGNRNAGGFYALHCAARHGDLDAVKLLTSKGYDIDVPDGEGYTPLMLAAKEGYGSICEHLISYGANCNTKNARGETALSLARKYFGGKNEAEAVILDELARKLVLDGAYVQKHTRGGKGSPHGKEIKMGSTGVLRWGNSSRRNVICCVAELGPSLAFRRNRHKKGDADDPGIFRVLTTKNKEVHFVCDGGSEAAQLWVRGIKLITKQATFRERGYL 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01822 753 SUPERFAMILY Ankyrin repeat 302 619 IPR036770 -
Bva04g01822 753 ProSiteProfiles Ankyrin repeat region circular profile. 477 509 - -
Bva04g01822 753 SMART ANK_2a 443 473 IPR002110 GO:0005515
Bva04g01822 753 SMART ANK_2a 510 543 IPR002110 GO:0005515
Bva04g01822 753 SMART ANK_2a 577 606 IPR002110 GO:0005515
Bva04g01822 753 SMART ANK_2a 373 402 IPR002110 GO:0005515
Bva04g01822 753 SMART ANK_2a 112 140 IPR002110 GO:0005515
Bva04g01822 753 SMART ANK_2a 544 573 IPR002110 GO:0005515
Bva04g01822 753 SMART ANK_2a 303 332 IPR002110 GO:0005515
Bva04g01822 753 SMART ANK_2a 477 506 IPR002110 GO:0005515
Bva04g01822 753 SMART ANK_2a 216 245 IPR002110 GO:0005515
Bva04g01822 753 SMART ANK_2a 79 108 IPR002110 GO:0005515
Bva04g01822 753 SMART ANK_2a 340 369 IPR002110 GO:0005515
Bva04g01822 753 SMART ANK_2a 170 199 IPR002110 GO:0005515
Bva04g01822 753 ProSiteProfiles Ankyrin repeat profile. 79 111 IPR002110 GO:0005515
Bva04g01822 753 Gene3D - 274 425 IPR036770 -
Bva04g01822 753 ProSiteProfiles Ankyrin repeat profile. 577 609 IPR002110 GO:0005515
Bva04g01822 753 ProSiteProfiles Ankyrin repeat region circular profile. 303 331 - -
Bva04g01822 753 Gene3D - 6 166 IPR036770 -
Bva04g01822 753 ProSiteProfiles Ankyrin repeat profile. 303 335 IPR002110 GO:0005515
Bva04g01822 753 SUPERFAMILY Ankyrin repeat 77 246 IPR036770 -
Bva04g01822 753 ProSiteProfiles Ankyrin repeat profile. 477 509 IPR002110 GO:0005515
Bva04g01822 753 Gene3D - 426 527 IPR036770 -
Bva04g01822 753 Gene3D - 528 633 IPR036770 -
Bva04g01822 753 ProSiteProfiles Ankyrin repeat region circular profile. 79 107 - -
Bva04g01822 753 ProSiteProfiles Ankyrin repeat region circular profile. 544 575 - -
Bva04g01822 753 PANTHER ANKYRIN REPEAT-CONTAINING 5 747 - -
Bva04g01822 753 Pfam Ankyrin repeats (3 copies) 84 163 IPR002110 GO:0005515
Bva04g01822 753 Pfam Ankyrin repeats (3 copies) 540 608 IPR002110 GO:0005515
Bva04g01822 753 Pfam Ankyrin repeats (3 copies) 344 400 IPR002110 GO:0005515
Bva04g01822 753 Pfam Ankyrin repeats (3 copies) 276 331 IPR002110 GO:0005515
Bva04g01822 753 Gene3D - 167 252 IPR036770 -
Bva04g01822 753 ProSiteProfiles Ankyrin repeat profile. 344 372 IPR002110 GO:0005515
Bva04g01822 753 PANTHER ANKYRIN DOMAIN PROTEIN 5 747 - -
Bva04g01822 753 ProSiteProfiles Ankyrin repeat region circular profile. 577 608 - -
Bva04g01822 753 ProSiteProfiles Ankyrin repeat profile. 544 576 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01822 Bva-Chr4 18970110 18975151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01822 448 618 Ion Channels AT2G25600 29.240 1.17e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01822 - - gmx:100777347 1139.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01822 04 18970110 18975151 Bva04g01822 04 18970110 18975151 ECH