Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01815 ATGGACAAAACTAGAATTTCCGAACATGTTGTGAACTCAAAGAGCGGTATCAATTCAGCCACCAGAACTTTCCACAGCCTCAGGCTCCCCCTTGAACTTCCTCCTCCTCACGCTTCTCTTTCAGTCGCAGATTATGTTTTCTCACGCCGACGCAACTCACCTTGGTCTGACCCGGTTGCACTCATCGACGCGGCCACTCGTCGACGTGTTTCCTACTCCGAGTTCACCCACCGGACGCTAACATTAGCCGCCAATCTCAGCTCCCTCATAGGACTATCCAAAGGAGACACGGCATTCATATTGTCTTCAAATCTCGTCAAGGTGCCCATTCTCTACTTCGCATTACTTTCTCTCGGTGTGATCGTCTCTCCGGCCAACCCAATCAGTACAGACTCTGAGATTTCCCGCCTCGTCGAGCTATCCAAACCGATAATCGCCTTTGCCACGTCATCCACGGGGGATAAACTCCCCAAGCTCTGTTTGGGAGCCATACTCCTCGACTCGCCCGAGTTCGACTCGCTCATGACGACTACAAACACACACAGTAATCTCCCGCTCCCCCGCGCTGAGGTGAGTCAATCCGACGTGGCAGCGATTCTGTACTCGTCGGGGACCACGGGGAAGATGAAGGGGGTCATGTTGACCCACCGGAATCTGACGGCATCAGTCGCCAGTTACAATTCAGCCAGTCCTCAGAGGAAGTCGCCGGCGCTGTTTCTCCATACGATGGCGTATTTTCACGTATACGGGTTCGCTTACTGCCTGAGGTCTGTAGCCTTATCAGAAACGGTGGTTTTGATGGAGAGGTTTAGCTTAAGGGGTATGTTGAGTGCGGTGGAGAAGTTCAGGGTGACTCACCTTGCTCTGGTCCCACCGGTGGTGGTGGCGATGATCAAAATCGGTATAACGGAAGGCTACGATTTAAGCTCGTTGGAAGGCGTTAGATGTGGTGCTGCTCCTTTGGGAAAGGACATTGTCGCGGCTTTCCATCGCAAGTTCCCCACGGTTGTGCTTGCCCAGGGATACGGGTTGACCGAGTCAACGGCGACGGTTGCTCTAACAGTGGGTCCCGTGGAGGCTCGTCGGGCAGGAACAACAGGTAAGCTAATAGCAGGTATAGAAGCGAAAATTATAGACCCGAATACAGGGGAATCCATGCTTCCTAATGAACAAGGGGAAATCTGGCTCAGAGGACCTTCAATAATGAAAGCAGGTTATGTGGGTGACTCCGAAGCAAGTAGTGCAACTCTGGTAGATGGGTGGTTAAAGACTGGAGACCTTGGTTATATTGACCAGGAAGGTTTCCTATATATTGTGGATAGGTTGAAAGAATTAATCAAATACAAGGCATACCAGGTGGCGCCTGCAGAGCTGGAACAGTTACTCCAGTCTCACCCAGATATTAAGGACGCTGCAGTTGTTCCATATCCCGATGAAGAAGGCGGCCAGGTACCCTTGGCCTGTGTGGTAAGGCAACCGCAAAGTTCACTTGGGGAAGcagaaataattgattttattgccAGACAGGTGGCACCCTACAAGAAAATAAGGCGTGTAGCGTTTGTTGATTCCATACCAAAAACTGCATCAGGCAAAATACTGAGGAAGGACTTAACTAAAATTGTCCTCCAAAAATCTTTCTCTAAGCTGTA 1652 0.5012 MDKTRISEHVVNSKSGINSATRTFHSLRLPLELPPPHASLSVADYVFSRRRNSPWSDPVALIDAATRRRVSYSEFTHRTLTLAANLSSLIGLSKGDTAFILSSNLVKVPILYFALLSLGVIVSPANPISTDSEISRLVELSKPIIAFATSSTGDKLPKLCLGAILLDSPEFDSLMTTTNTHSNLPLPRAEVSQSDVAAILYSSGTTGKMKGVMLTHRNLTASVASYNSASPQRKSPALFLHTMAYFHVYGFAYCLRSVALSETVVLMERFSLRGMLSAVEKFRVTHLALVPPVVVAMIKIGITEGYDLSSLEGVRCGAAPLGKDIVAAFHRKFPTVVLAQGYGLTESTATVALTVGPVEARRAGTTGKLIAGIEAKIIDPNTGESMLPNEQGEIWLRGPSIMKAGYVGDSEASSATLVDGWLKTGDLGYIDQEGFLYIVDRLKELIKYKAYQVAPAELEQLLQSHPDIKDAAVVPYPDEEGGQVPLACVVRQPQSSLGEAEIIDFIARQVAPYKKIRRVAFVDSIPKTASGKILRKDLTKIVLQKSFSKL 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01815 550 ProSitePatterns Putative AMP-binding domain signature. 199 210 IPR020845 -
Bva04g01815 550 Gene3D - 31 443 IPR042099 -
Bva04g01815 550 Gene3D - 444 547 IPR045851 -
Bva04g01815 550 Pfam AMP-binding enzyme C-terminal domain 457 532 IPR025110 -
Bva04g01815 550 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 13 544 - -
Bva04g01815 550 Pfam AMP-binding enzyme 55 448 IPR000873 -
Bva04g01815 550 CDD 4CL 37 538 - -
Bva04g01815 550 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 13 544 - -
Bva04g01815 550 SUPERFAMILY Acetyl-CoA synthetase-like 41 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01815 Bva-Chr4 18935887 18938213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01815 9 550 Monolignol Biosynthesis Gene Families AT5G63380 50.179 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01815 - - qsu:111992510 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01815 04 18935887 18938213 Bva04g01815 04 18935887 18938213 ECH
Bva03g00326 03 1931238 1933855 Bva04g01815 04 18935887 18938213 ECH