Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01814 ATGTTTGACTATCCTGAAGAAGAGAACCCCAAGCCAAGTCTCTCTGCACTTCGTGCTTATGATGCAACTTGGGCCATAGCTCGGGCTGTAAAGAAATCACATGCAAAGTTCATGCCAGATGAATTTATAGAGAAAATACTGTCCAGTAATTTTCAGGGACTAAGTGGTAAGATAAGCTTCAAAGATGGAAAACTGTTGCAATTGCCAACCTTTGATATAATTCATGTGATTGGAAGAAGTTACAAAGAGTTGGTGTTTTGGTCTCCAGCACTTGGTTTTTCTAAGAACCTAGTCAGACACCAGCTAATGGAGATGAACATAGACAATGGTTCAAGTGGCATTTTAGGTACAATTTATTGGCCGGGTGGGTTACTAGCAGTTCCAAATGAAGggacaaataataataatataaaacagcCATTGAGAATTGGGGTTCCTGCAAATGGTGCCTTTAAACAGTTTGTGAATGTAAGCTATGATCAGATCCGGAACCAAACCTCCATCACTGGTTTCTCAATTGATGTCTTTAACGCTGCTGTTAAACGTTTTCCACATCAGTTGCCATATGTTTTTGTTCCCTTCTATGGTTCTTACGATGAAATGGTGGAGCAAGTCTATAATAAGAAACTGGATGCTGCCGTTGGAGATACAGAAATTATGGCTTATAGATACCAATATGTAGAATTTTCACATCCATATGTTGAATCTGGCCTTGAGATGATAGTTACTGTAAAGCCAGATAAATCGAAAGAAACATGGATGTTTATGCAAGCCTTTACAAAGGAGATGTGGTTGATTATGGCTGCAATGCACATTTTCATAGGATTTGTCATTTGGTTGATCGAACGGGAAGTGAATCCAGAACTGAGAGGGTTTGGTGCCATGCTTTGGTTTTTAGTCACTGTGCTATTCTATGCACACAGAGAACAAATAAGAAGCCCCTTGGCTCGAATCGTGCTGACTCCATGGTTATTTGTAATTCTTATAGTGACGACAAGTTTTACTGCAAGTTTGACATCTATGCTGACTATCTCGCAGATTGAACCATCTATCTTAGATGTTGAGACCCTTCTGAGGACAAATGCTTTTGTTGGCTGTAATGGGAATTCATTTATTGTGCGGTACTTGATTGAAGCATTACATTTTAAGCCTGAGAACATAAGGAGAATTGCTTCCATAAGAGATTACCCTGCAGCCTTTAAGAACAATGATATCAAAGCagctttctttgtttgtcCTCATGCCAAAGTCTTCCTCTCAATGTACTGCAAGGGCTACATGAAAGCAGGGAACACTTTCAAGCTCGGTGGCTTTGGTTATGCATTCCCAAAGAATTCCACTCTTGTCGTTGACATGTCAGTGGCACTGCTGAATTTGATAGAGAGTAGAGTTACAGAGCagttagagaaaaatatgctATCCAATGCCAGTTGTCCCGATTCAAAGAGCCAAACGCAAGATGGGTCCTCATTAGGTGTTCGACCTTTCTCTGGTCTATTTTGCATTTGTGGCTCCATTGCTGTCCTTGCGTTGTTATATACTCTACAGGGTTTGCTGGCATGGAATGTAGAAATTTTGATGTTAGGGCGAATATGGACGAGGGTTAGGAGCTTGACAAGAGTTAGTCCAGCAGCTGGCCCAGAAGCAAATAATAATCCACGGGAGATAACAGAGCAAAGCCCATTGGGAATTCAACTTGTTGATGCTGTTATGATTCCTCGTGCTTCCAACCAAGTTGTTTGTCAAACTATCATTTCACAAGGTTACTCAacacataatttaaatta 1787 0.3923 MFDYPEEENPKPSLSALRAYDATWAIARAVKKSHAKFMPDEFIEKILSSNFQGLSGKISFKDGKLLQLPTFDIIHVIGRSYKELVFWSPALGFSKNLVRHQLMEMNIDNGSSGILGTIYWPGGLLAVPNEGTNNNNIKQPLRIGVPANGAFKQFVNVSYDQIRNQTSITGFSIDVFNAAVKRFPHQLPYVFVPFYGSYDEMVEQVYNKKLDAAVGDTEIMAYRYQYVEFSHPYVESGLEMIVTVKPDKSKETWMFMQAFTKEMWLIMAAMHIFIGFVIWLIEREVNPELRGFGAMLWFLVTVLFYAHREQIRSPLARIVLTPWLFVILIVTTSFTASLTSMLTISQIEPSILDVETLLRTNAFVGCNGNSFIVRYLIEALHFKPENIRRIASIRDYPAAFKNNDIKAAFFVCPHAKVFLSMYCKGYMKAGNTFKLGGFGYAFPKNSTLVVDMSVALLNLIESRVTEQLEKNMLSNASCPDSKSQTQDGSSLGVRPFSGLFCICGSIAVLALLYTLQGLLAWNVEILMLGRIWTRVRSLTRVSPAAGPEANNNPREITEQSPLGIQLVDAVMIPRASNQVVCQTIISQGYSTHNLN 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01814 595 CDD GluR_Plant 139 473 - -
Bva04g01814 595 Gene3D - 251 382 - -
Bva04g01814 595 SUPERFAMILY Periplasmic binding protein-like II 115 470 - -
Bva04g01814 595 Pfam Ligand-gated ion channel 471 504 IPR001320 GO:0015276|GO:0016020
Bva04g01814 595 Gene3D - 132 250 - -
Bva04g01814 595 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 5 538 - -
Bva04g01814 595 SUPERFAMILY Periplasmic binding protein-like I 12 88 IPR028082 -
Bva04g01814 595 Pfam Bacterial extracellular solute-binding proteins, family 3 165 470 IPR001638 -
Bva04g01814 595 Gene3D - 3 66 - -
Bva04g01814 595 SMART GluR_14 142 475 IPR001320 GO:0015276|GO:0016020
Bva04g01814 595 Pfam Receptor family ligand binding region 6 76 IPR001828 -
Bva04g01814 595 PANTHER GLUTAMATE RECEPTOR 5 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01814 Bva-Chr4 18932994 18935314 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01814 6 512 Ion Channels AT2G29100 35.572 6.02e-89 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01814 - - gmx:100777873 648.662