Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01813 ATGGGTAGAGAGCAGAAGATTGCCATTGAAATTGCAGTCGAAGAATTCAACAGCTTAAGTTGTTTTAACTCTAAGctgattttgaatttcaagAATTCTCGTGGGAATTCAGCTCAAACAGTTGCTGCTGCTATGGATCTTGCACATAGCAAACGAGTGCAAGCCATCATAGGAACAATAACACAAAACGAAGCAACTCTGGCAACTGAGATCAATAACACCAGAAACAACATTCCCATTATATCTCTATCTTCACCTACCAGCACAGACTCATTATCAACTCCATTGCCATACTTTATCCAACTGGGCGACGATATCACCCTTCACATGCAGTGCATTGCTGCCATTGTTGGCTCATACAAGTGGCGAAAggttacaacaatctatgaaTACAGTAATGGTTTTTCCTCTAACCCAGGGGTTTTAACTCTCCTCTCCTATTCTCTTCGACTCATTGGCTCCGAGATTGATCACCATTTAGCTTTGCCTTCACTGTCTTCTCTGTTAAACCCAAGTGCTACAATTCAACAGGAGCTTAACCGTCTCAAGAGCAAAAGTAACAGGATCTTTTTGATTGTACAGTCCTCTTTAGAGCTTGCTACTTTGCTTTTTGAGAAGGCAAAGGAAATGGGAATGATGGAAAATGGTTATGTGTGGATTATCCCAGACGGGGTTGCTGGCTTTCTTGATTCAGCTGACTCCTCTGTTATCTCAAACATGCAAGGTGTTCTTGGATTCAAAAGCAACTACATCGAAACGAGCGAAGACAGTTA 773 0.401 MGREQKIAIEIAVEEFNSLSCFNSKLILNFKNSRGNSAQTVAAAMDLAHSKRVQAIIGTITQNEATLATEINNTRNNIPIISLSSPTSTDSLSTPLPYFIQLGDDITLHMQCIAAIVGSYKWRKVTTIYEYSNGFSSNPGVLTLLSYSLRLIGSEIDHHLALPSLSSLLNPSATIQQELNRLKSKSNRIFLIVQSSLELATLLFEKAKEMGMMENGYVWIIPDGVAGFLDSADSSVISNMQGVLGFKSNYIETSEDS 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01813 257 Pfam Receptor family ligand binding region 6 248 IPR001828 -
Bva04g01813 257 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 255 - -
Bva04g01813 257 SUPERFAMILY Periplasmic binding protein-like I 2 253 IPR028082 -
Bva04g01813 257 Gene3D - 106 256 - -
Bva04g01813 257 PANTHER GLUTAMATE RECEPTOR 1 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01813 Bva-Chr4 18931787 18932962 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01813 8 255 Ion Channels AT5G11180 32.800 7.01e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01813 - - gmx:100777873 303.908